SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003400049
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr20:31661384-31741121
Size: 79737
Super-enhancer rank 49
Number of SE elements: 17
ChIP density(Case|Control): 105795.0516|6945.0927
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BCL2L1 ;
ROSE Overlap TPX2 ; BCL2L1 ;
ROSE Proximal COX4I2 ;
ROSE Closest BCL2L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA BCL2L1 ; ID1 ; MIR3193 ; COX4I2 ; TPX2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400049 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers