SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400039
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr4:31011876-31108505
Size: 96629
Super-enhancer rank 39
Number of SE elements: 16
ChIP density(Case|Control): 121791.1916|11914.3557
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDH7 ;
ROSE Overlap PCDH7 ;
ROSE Proximal ;
ROSE Closest PCDH7 ;
Lasso ;
PreSTIGE ;
ABC LOC105377651 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400039 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers