SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400024
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr4:11602386-11653714
Size: 51328
Super-enhancer rank 24
Number of SE elements: 8
ChIP density(Case|Control): 149256.6912|6975.4752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HS3ST1 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest HS3ST1 ;
Lasso ;
PreSTIGE ;
ABC HS3ST1 ; ZNF518B ; NKX3-2 ; LINC01096 ; BOD1L1 ; RAB28 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400024 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers