SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400012
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr18:3592307-3631143
Size: 38836
Super-enhancer rank 12
Number of SE elements: 6
ChIP density(Case|Control): 200379.5015|4202.1634
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FLJ35776 ;
ROSE Overlap FLJ35776 ; DLGAP1 ;
ROSE Proximal ;
ROSE Closest FLJ35776 ;
Lasso ;
PreSTIGE ;
ABC DLGAP1-AS1 ; GAPLINC ; TGIF1 ; MYL12B ; LOC104968399 ; LPIN2 ; DLGAP1-AS2 ; MYL12A ; ZBTB14 ; EMILIN2 ; METTL4 ; NDC80 ; CBX3P2 ; SMCHD1 ;
BETA DLGAP1-AS2 ; DLGAP1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers