SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003400010
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116
Genomic region: chr9:21504586-21618056
Size: 113470
Super-enhancer rank 10
Number of SE elements: 8
ChIP density(Case|Control): 223456.471|13831.993
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC554202 ;
ROSE Overlap MIR31 ; LOC554202 ;
ROSE Proximal IFNE ;
ROSE Closest LOC554202 ;
Lasso ;
PreSTIGE ;
ABC MIR31HG ; FOCAD ; KLHL9 ; FOCAD-AS1 ; MLLT3 ; MTAP ; CDKN2A ; CDKN2B-AS1 ;
BETA IFNE ; MIR31 ; MIR31HG ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003400010 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers