SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_01_003100305
Species: Human
Data source: ENCODE
Biosample type: Induced pluripotent stem cell line
Tissue type: Skin
Biosample name: GM23338
Genomic region: chr19:53660401-53669899
Size: 9498
Super-enhancer rank 305
Number of SE elements: 3
ChIP density(Case|Control): 7858.6452|1426.5996
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR512-2;
ROSE Overlap MIR512-1; MIR512-2;
ROSE Proximal MIR520B; MIR519B; MIR518F; MIR526A1; MIR521-2; DPRX; MIR526B; MIR520C; MIR520E; MIR520A; MIR519D; MIR520F; MIR519E; MIR519C; MIR517A; MIR518B; MIR523; MIR498; MIR525; MIR524; MIR515-1; MIR1323; MIR1283-1; MIR518C;
ROSE Closest MIR512-2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003100305 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers