SEdb 2.0
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Super-enhancer overview

SE ID: SE_01_001900630
Species: Human
Data source: ENCODE
Biosample type: Primary cell
Tissue type: Brain and spinal cord
Biosample name: astrocyte
Genomic region: chr3:54950769-54970391
Size: 19622
Super-enhancer rank 630
Number of SE elements: 5
ChIP density(Case|Control): 25310.4178|3002.166
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WNT5A;
ROSE Overlap CACNA2D3;
ROSE Proximal LRTM1;
ROSE Closest LRTM1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_001900630 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers