SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_00_005300858
Species: Human
Data source: Roadmap
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: trophoblast cell originated from H1
Genomic region: chr19:45505339-45528173
Size: 22834
Super-enhancer rank 858
Number of SE elements: 4
ChIP density(Case|Control): 15883.3304|3466.2012
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VASP;
ROSE Overlap VASP; OPA3;
ROSE Proximal PPM1N; FOSB; RTN2;
ROSE Closest VASP;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_005300858 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers