SEdb 2.0
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Super-enhancer overview

SE ID: SE_00_005300275
Species: Human
Data source: Roadmap
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: trophoblast cell originated from H1
Genomic region: chr1:1423050-1435357
Size: 12307
Super-enhancer rank 275
Number of SE elements: 3
ChIP density(Case|Control): 26904.3327|2156.1864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM88B;
ROSE Overlap LOC102724312; TMEM88B;
ROSE Proximal AURKAIP1; MRPL20; VWA1; ANKRD65; ATAD3B; ATAD3C; LOC148413; CCNL2; LOC102724312;
ROSE Closest TMEM88B;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_005300275 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers