SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_00_004100541
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Stomach
Biosample name: stomach_3y
Genomic region: chr3:171790323-171811681
Size: 21358
Super-enhancer rank 541
Number of SE elements: 7
ChIP density(Case|Control): 13094.5898|2009.7878
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLD1;
ROSE Overlap PLD1;
ROSE Proximal TMEM212;
ROSE Closest PLD1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_004100541 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers