SEdb 2.0
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Super-enhancer overview

SE ID: SE_00_003900569
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Spleen
Biosample name: spleen_3y
Genomic region: chr3:46924862-46961167
Size: 36305
Super-enhancer rank 569
Number of SE elements: 6
ChIP density(Case|Control): 30728.552|5442.1195
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC12;
ROSE Overlap CCDC12;
ROSE Proximal NBEAL2; PTH1R;
ROSE Closest CCDC12;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_003900569 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers