SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_00_003800026
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Spinal cord
Biosample name: spinal-cord_108d
Genomic region: chr5:141475127-141526490
Size: 51363
Super-enhancer rank 26
Number of SE elements: 10
ChIP density(Case|Control): 64368.1116|4401.8091
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5;
ROSE Overlap PCDHGC4; PCDHGC3; PCDHGB3; PCDHGA1; PCDHGA2; PCDHGA11; PCDHGA8; PCDHGC5; PCDHGA10; PCDHGA12; PCDHGA4; PCDHGA9; PCDHGB6; DIAPH1; PCDHGA5; PCDHGB4; PCDHGB5; PCDHGB7; PCDHGA7; PCDHGB1; PCDHGA3; PCDHGA6; PCDHGB2;
ROSE Proximal PCDHGB8P; PCDHGA12;
ROSE Closest PCDHGC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_003800026 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers