SEdb 2.0
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Super-enhancer overview

SE ID: SE_00_003800002
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Spinal cord
Biosample name: spinal-cord_108d
Genomic region: chr17:48564415-48627663
Size: 63248
Super-enhancer rank 2
Number of SE elements: 1
ChIP density(Case|Control): 207826.6032|4376.7616
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC404266;
ROSE Overlap HOXB4; HOXB7; HOXB6; LOC404266; HOXB9; HOXB5; HOXB8; HOXB3; MIR10A;
ROSE Proximal HOXB1; MIR196A1; HOXB2;
ROSE Closest LOC404266;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_003800002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers