SEdb 2.0
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Super-enhancer overview

SE ID: SE_00_002300998
Species: Human
Data source: Roadmap
Biosample type: In vitro differentiated cell
Tissue type: Embryo
Biosample name: mesenchymal-stem-cell
Genomic region: chr5:83470827-83487399
Size: 16572
Super-enhancer rank 998
Number of SE elements: 2
ChIP density(Case|Control): 9384.7236|1400.334
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VCAN;
ROSE Overlap VCAN;
ROSE Proximal VCAN;
ROSE Closest VCAN;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_002300998 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers