SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000151445
Gene: VIPAS39 Gene type: protein_coding
Strand: - External links:
Genomic region: chr14:77426675-77457952 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_149200662 chr14:77398906-77411958 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 662 1 321 16 0 0 189 NOXRED1,VIPAS39,AHSA1,SAMD15,TMED8
SE_02_082000767 chr14:77403540-77410628 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 767 3 177 6 0 0 189 NOXRED1,VIPAS39,AHSA1,SAMD15,TMED8
SE_02_082200469 chr14:77404147-77409488 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 469 2 131 5 0 0 189 NOXRED1,VIPAS39,AHSA1,SAMD15,TMED8
SE_02_104602458 chr14:77469051-77491241 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2458 11 668 82 3 0 1077 AHSA1,ISM2,NOXRED1,VIPAS39
SE_02_092900159 chr14:77488325-77549885 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 159 49 1748 233 3 39 1064 SPTLC2,ISM2,VIPAS39,AHSA1
SE_02_093000096 chr14:77489029-77565757 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 96 50 2241 301 6 81 1269 SPTLC2,ISM2,VIPAS39,AHSA1
SE_02_139000422 chr14:77507217-77517765 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 422 2 288 32 0 0 570 SPTLC2,VIPAS39,AHSA1,ISM2
Genomic distribution of SEs associated with VIPAS39
Genome Browser

The strength of the tissue affected by the gene

Expression of VIPAS39

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)