SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000100271
Gene: TTLL1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr22:43039516-43089419 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_039601851 chr22:42961896-43052413 Sample_02_0396 Skin NHEK-D 1851 29 2690 332 6 92 725 PACSIN2,TTLL1
SE_02_077501074 chr22:42967590-43040641 Sample_02_0775 Pancreas EndoC-BH1_SE 1074 22 2160 272 6 87 470 PACSIN2,LOC100506679,TTLL1
SE_02_104600538 chr22:43017345-43101576 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 538 26 2762 296 5 53 1336 LOC100506679,TTLL1,MCAT,TSPO,PACSIN2,BIK
SE_02_046200197 chr22:43022643-43044063 Sample_02_0462 Lung NCI-H2171 cells 197 13 681 83 3 14 388 LOC100506679,TTLL1,PACSIN2
SE_02_129200285 chr22:43024442-43043214 Sample_02_1292 Lung JHU-LX110-SCLC PDX 285 7 613 72 3 13 388 LOC100506679,TTLL1,PACSIN2
SE_02_123900496 chr22:43024760-43043433 Sample_02_1239 Skin Waga_virus_positive 496 7 607 71 3 13 388 LOC100506679,TTLL1,PACSIN2
SE_02_123700253 chr22:43027223-43045139 Sample_02_1237 Skin MKL2_virus_positive 253 5 579 67 3 0 388 LOC100506679,TTLL1,PACSIN2
SE_02_021600624 chr22:43028310-43051203 Sample_02_0216 Skin NHEK_scramble 624 7 721 81 2 0 444 TTLL1,PACSIN2
SE_02_023700435 chr22:43067079-43130779 Sample_02_0237 Colon V389 435 19 2124 218 9 52 1157 BIK,TTLL1,TSPO,MCAT
SE_02_077501341 chr22:43074019-43131423 Sample_02_0775 Pancreas EndoC-BH1_SE 1341 24 1910 191 9 40 917 BIK,TTLL1,MCAT,LOC100506679,TSPO
SE_02_092300873 chr22:43076611-43104531 Sample_02_0923 Heart fetal heart_PCW10_12522 873 7 952 89 4 15 205 TTLL1,MCAT,LOC100506679,TSPO,BIK
SE_02_092201093 chr22:43076804-43103767 Sample_02_0922 Heart fetal heart_PCW10_12434 1093 7 909 84 3 15 205 TTLL1,MCAT,LOC100506679,TSPO,BIK
SE_02_024200214 chr22:43076972-43130831 Sample_02_0242 Colon V481 214 8 1766 178 9 37 848 BIK,TTLL1,TSPO,MCAT
SE_02_092101065 chr22:43076975-43104668 Sample_02_0921 Heart embryonic heart_CS22 1065 10 932 89 4 15 205 TTLL1,MCAT,LOC100506679,TSPO,BIK
SE_02_074700436 chr22:43077147-43136221 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 436 21 1967 197 10 52 1155 MCAT,BIK,TTLL1,LOC100506679,TSPO
SE_02_047700400 chr22:43078807-43132650 Sample_02_0477 Colon intestinal epithelial organoids_139a 400 15 1756 175 9 38 966 MCAT,BIK,TTLL1,LOC100506679,TSPO
SE_02_047800455 chr22:43078857-43132761 Sample_02_0478 Colon normal colon mucosa 455 18 1755 175 9 38 985 MCAT,BIK,TTLL1,LOC100506679,TSPO
SE_02_074601277 chr22:43085420-43104900 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1277 7 636 59 4 15 130 TTLL1,MCAT,LOC100506679,TSPO,BIK
SE_02_074501412 chr22:43086283-43104973 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1412 4 606 58 4 15 130 TTLL1,MCAT,LOC100506679,TSPO,BIK
SE_02_033500247 chr22:43090471-43149403 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 247 10 1959 183 10 63 1312 BIK,MCAT,TSPO,TTLL12,TTLL1
SE_02_033300429 chr22:43090885-43131408 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 429 6 1318 138 9 32 643 BIK,TSPO,TTLL1,MCAT
SE_02_099500312 chr22:43091333-43149110 Sample_02_0995 Blood MOLM-13_empty vector 312 24 1921 180 10 63 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_033100408 chr22:43091474-43148335 Sample_02_0331 Haematopoietic and lymphoid tissue MOLM14_untreated 408 8 1881 176 10 63 1312 BIK,MCAT,TSPO,TTLL12,TTLL1
SE_02_134000722 chr22:43091664-43149216 Sample_02_1340 Blood acute myeloid leukemia 722 20 1909 180 10 63 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_012800554 chr22:43091725-43148988 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 554 19 1904 179 10 63 1312 BIK,MCAT,TSPO,TTLL12,TTLL1
SE_02_109800151 chr22:43091992-43148942 Sample_02_1098 Blood THP1_DMSO_noPMA 151 16 1898 178 10 63 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_133100144 chr22:43092017-43148942 Sample_02_1331 Blood Molm13_CTRL 144 18 1898 178 10 63 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_046100630 chr22:43092528-43149086 Sample_02_0461 Blood MV-4-11-B cells 630 17 1890 178 10 63 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_020200053 chr22:43098069-43130376 Sample_02_0202 Stomach YCC7 53 7 1047 114 9 32 643 BIK,TSPO,TTLL1,MCAT
SE_02_132300264 chr22:43098492-43131609 Sample_02_1323 Colon DLD1_WT 264 6 1068 116 9 32 643 BIK,TTLL1,MCAT,TSPO
SE_02_035400906 chr22:43099884-43130583 Sample_02_0354 Colon Colo205 906 7 1000 111 8 32 643 BIK,TSPO,TTLL1,MCAT
SE_02_070900566 chr22:43100605-43130055 Sample_02_0709 Pancreas hT85_organoid 566 10 966 107 8 32 643 BIK,TTLL1,MCAT,TSPO
SE_02_034500381 chr22:43102958-43130449 Sample_02_0345 Blood AML8 381 5 877 98 6 22 643 BIK,TSPO,TTLL1,MCAT
SE_00_004200169 chr22:43103628-43160935 Sample_00_0042 Stomach stomach_30y 169 10 1858 180 8 67 1777 BIK,TSPO,MCAT,TTLL12,TTLL1
SE_02_066900904 chr22:43103660-43116548 Sample_02_0669 Prostate prostate cancer_DSG 904 4 409 43 3 12 117 BIK,TTLL1,MCAT,TSPO
SE_02_061701078 chr22:43103663-43149094 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1078 6 1501 140 7 53 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_104100120 chr22:43104404-43129897 Sample_02_1041 Peripheral blood CD4+ cells_CTCL1135 120 10 823 86 5 22 638 BIK,TTLL1,MCAT,TSPO
SE_02_088500761 chr22:43104420-43131125 Sample_02_0885 Blood NALM6_2 761 4 847 90 5 22 643 BIK,TTLL1,MCAT,TSPO
SE_01_005500252 chr22:43109988-43148584 Sample_01_0055 Haematopoietic and lymphoid tissue OCI-LY7 252 4 1271 115 6 48 1312 BIK,MCAT,TSPO,TTLL12,TTLL1
SE_02_077900263 chr22:43110129-43149468 Sample_02_0779 Lymphoma U2932 263 16 1303 118 6 48 1312 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_00_003500148 chr22:43110717-43161013 Sample_00_0035 Sigmoid colon sigmoid-colon 148 11 1633 156 7 61 1738 BIK,TSPO,MCAT,TTLL12,TTLL1
SE_02_121800695 chr22:43112625-43149190 Sample_02_1218 Bone marrow Daudi 695 14 1225 112 6 46 1195 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_081900808 chr22:43113006-43130413 Sample_02_0819 Ovary Mucinous ovarian cancer 808 4 572 65 5 15 526 BIK,TTLL1,MCAT,TSPO
SE_02_050100451 chr22:43113284-43130188 Sample_02_0501 Blood HL-60_CTRL 451 4 559 65 5 15 526 BIK,TTLL1,MCAT,TSPO
SE_02_025600364 chr22:43114470-43164356 Sample_02_0256 Peripheral blood MV411 364 14 1648 157 5 79 1943 BIK,TSPO,MCAT,TTLL12,TTLL1
SE_00_005600336 chr22:43114706-43184277 Sample_00_0056 Sigmoid colon sigmoid colon 3y 336 21 2514 277 9 187 3783 TSPO,BIK,MCAT,TTLL12,TTLL1
SE_02_094801077 chr22:43114808-43129195 Sample_02_0948 Pharyng Detroit562 1077 2 467 55 3 7 389 BIK,TTLL1,MCAT,TSPO
SE_02_057300522 chr22:43114810-43148246 Sample_02_0573 Blood Nalm6_1 522 8 1115 97 4 41 1195 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_134100358 chr22:43115362-43154619 Sample_02_1341 Blood MV411 358 14 1293 122 4 41 1502 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_092800576 chr22:43115841-43164083 Sample_02_0928 Peripheral blood neutrophils_Ecoli 576 9 1589 151 5 79 1943 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_104600383 chr22:43118120-43184883 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 383 34 2419 264 9 187 3783 TSPO,BIK,MCAT,TTLL12,TTLL1
SE_02_102900175 chr22:43118156-43160561 Sample_02_1029 Colon HCT116 175 19 1384 129 5 55 1653 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_151000424 chr22:43118381-43160187 Sample_02_1510 Lung H3122_LR_Pano 424 10 1360 128 5 55 1653 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_113100495 chr22:43118775-43130777 Sample_02_1131 Pancreas T3M4 wt 495 5 394 46 3 10 526 BIK,TTLL1,MCAT,TSPO
SE_02_103000511 chr22:43123765-43132145 Sample_02_1030 Colon DKO 511 1 307 21 1 10 543 BIK,TTLL1,MCAT,TSPO
SE_02_125400707 chr22:43124364-43129291 Sample_02_1254 Bladder Bladder tumor Basal1 707 2 188 13 1 8 296 BIK,TTLL1,MCAT,TSPO
SE_01_010401067 chr22:43124545-43155631 Sample_01_0104 Lung upper lobe of left lung 1067 7 1043 85 2 40 1391 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_020800323 chr22:43125005-43130350 Sample_02_0208 Stomach YCC3 323 3 200 13 1 9 415 BIK,TSPO,TTLL1,MCAT
SE_02_094600847 chr22:43125354-43129283 Sample_02_0946 Tongue HN12 847 1 160 12 1 8 295 BIK,TTLL1,MCAT,TSPO
SE_02_154000637 chr22:43125470-43129199 Sample_02_1540 Nasopharyngeal HK1 637 1 143 12 1 6 279 BIK,TTLL1,MCAT,TSPO
SE_02_076600765 chr22:43125655-43165163 Sample_02_0766 Ovary PEO1 765 12 1332 120 3 78 1832 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_02_064601262 chr22:43125733-43128584 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1262 2 100 11 1 5 181 BIK,TTLL1,MCAT,TSPO
SE_02_064501716 chr22:43125750-43129597 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1716 1 154 12 1 8 344 BIK,TTLL1,MCAT,TSPO
SE_02_064401163 chr22:43126286-43129925 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 1163 4 142 11 1 9 415 BIK,TTLL1,MCAT,TSPO
SE_02_129200428 chr22:43127362-43130273 Sample_02_1292 Lung JHU-LX110-SCLC PDX 428 2 115 9 1 8 415 BIK,TTLL1,MCAT,TSPO
SE_02_010000701 chr22:43127632-43164100 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 701 6 1219 106 2 77 1799 BIK,TSPO,MCAT,TTLL12,TTLL1
SE_02_143001003 chr22:43135948-43147658 Sample_02_1430 Blood Kasumi-3_mock-infected 1003 3 374 17 0 16 362 MCAT,BIK,TTLL1,TSPO,TTLL12
SE_02_153100511 chr22:43136215-43165067 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 511 9 928 80 1 54 1110 TSPO,MCAT,BIK,TTLL1,TTLL12
SE_00_005500618 chr22:43136625-43155306 Sample_00_0055 Spleen spleen 34y 618 6 583 45 0 16 669 TSPO,MCAT,BIK,TTLL1,TTLL12
Genomic distribution of SEs associated with TTLL1
Genome Browser

The strength of the tissue affected by the gene

Expression of TTLL1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)