SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000115129
Gene: TP53I3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:24077433-24085861 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103601972 chr2:23985273-24043368 Sample_02_1036 Mammary gland HCC70_XY018 1972 21 1472 157 3 84 2159 UBXN2A,C2ORF44,MFSD2B,FKBP1B,FAM228B,TP53I3,SF3B6
SE_02_122900657 chr2:23994925-24045484 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 657 12 1279 141 3 84 2159 UBXN2A,C2ORF44,MFSD2B,FKBP1B,FAM228B,TP53I3,SF3B6
SE_02_066300590 chr2:24076826-24095927 Sample_02_0663 Thyroid TT 590 2 471 78 0 0 877 TP53I3,FAM228B,FKBP1B,C2ORF44,PFN4,SF3B6
SE_02_074100841 chr2:24079448-24085295 Sample_02_0741 Muscle RH30 841 2 134 15 0 0 535 TP53I3,FAM228B,FKBP1B,C2ORF44,PFN4,SF3B6
SE_02_060300729 chr2:24081250-24085463 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 729 2 101 12 0 0 441 TP53I3,FAM228B,FKBP1B,C2ORF44,PFN4,SF3B6
SE_04_001000652 chr2:24105890-24120417 Sample_04_0010 Lung A549 TGFb 652 4 336 59 1 15 113 PFN4,FAM228B,TP53I3,SF3B6
SE_02_151400880 chr2:24108099-24116207 Sample_02_1514 Lung Differentiated AT1-like cells 880 3 208 31 0 4 54 PFN4,FAM228B,TP53I3,SF3B6
SE_02_151300942 chr2:24108205-24116019 Sample_02_1513 Lung Transitional AT2->1 cells 942 2 201 30 0 4 54 PFN4,FAM228B,TP53I3,SF3B6
SE_02_007600366 chr2:24116994-24125164 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 366 3 197 35 1 21 403 LOC375190,PFN4,TP53I3,SF3B14,C2ORF84
Genomic distribution of SEs associated with TP53I3
Genome Browser

The strength of the tissue affected by the gene

Expression of TP53I3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)