Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000234717 |
| Gene: | TMEM212-AS1 | Gene type: | lncRNA |
| Strand: | - | External links: |
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| Genomic region: | chr3:171815586-171900749 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_109700086 | chr3:171769138-171853217 |
Sample_02_1097 | Haematopoietic and lymphoid tissue | 697 | 86 | 39 | 2283 | 192 | 14 | 168 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_070900056 | chr3:171770818-171852785 |
Sample_02_0709 | Pancreas | hT85_organoid | 56 | 19 | 2226 | 189 | 14 | 165 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_086600230 | chr3:171770980-171852917 |
Sample_02_0866 | Malignant rhaboid tumor | TTC1240_SMARCB1_delCC | 230 | 28 | 2229 | 189 | 14 | 165 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_086200280 | chr3:171771000-171852787 |
Sample_02_0862 | Malignant rhaboid tumor | TTC1240_SMARCB1 FL | 280 | 29 | 2222 | 189 | 14 | 165 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_137200033 | chr3:171771122-171852552 |
Sample_02_1372 | Pancreas | PSN1-untreated | 33 | 28 | 2211 | 189 | 14 | 165 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_133200245 | chr3:171773284-171851579 |
Sample_02_1332 | Blood | Monomac6_CTRL | 245 | 19 | 2142 | 186 | 14 | 151 | 212 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_068200131 | chr3:171777043-171872126 |
Sample_02_0682 | Blood | Kasumi-1 | 131 | 26 | 2652 | 201 | 14 | 182 | 547 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_110700763 | chr3:171777445-171876296 |
Sample_02_1107 | Brain | SK-N-AS | 763 | 32 | 2740 | 205 | 14 | 204 | 547 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_151100095 | chr3:171777464-171852560 |
Sample_02_1511 | Lung | H3122_untreated | 95 | 21 | 2052 | 178 | 14 | 149 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_086400205 | chr3:171784585-171852782 |
Sample_02_0864 | Malignant rhaboid tumor | TTC1240_SMARCB1_K364del | 205 | 21 | 1859 | 155 | 13 | 149 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_086500241 | chr3:171785350-171852791 |
Sample_02_0865 | Malignant rhaboid tumor | TTC1240_SMARCB1_R377H | 241 | 21 | 1846 | 154 | 13 | 149 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_076300825 | chr3:171788935-171851557 |
Sample_02_0763 | Podocyte | podocyte_DEX | 825 | 13 | 1718 | 139 | 12 | 142 | 212 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_138000207 | chr3:171789162-171852131 |
Sample_02_1380 | Pancreas | Pancreatic_tumor_associated_fibroblasts_CW1_untreated | 207 | 15 | 1721 | 137 | 11 | 146 | 244 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_071300336 | chr3:171791032-171852410 |
Sample_02_0713 | Pancreas | BxPC3_sgTP63 | 336 | 17 | 1679 | 130 | 9 | 143 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_071200868 | chr3:171791059-171852088 |
Sample_02_0712 | Pancreas | BxPC3_sgNEG | 868 | 14 | 1669 | 130 | 9 | 143 | 242 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_090801114 | chr3:171791250-171875730 |
Sample_02_0908 | Heart | left ventricle_DCM_LV1262 | 1114 | 19 | 2358 | 155 | 9 | 190 | 547 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_058900055 | chr3:171791568-171852641 |
Sample_02_0589 | Cervix | HeLa Kyoto_Luci siRNA | 55 | 21 | 1679 | 125 | 9 | 139 | 249 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_059000054 | chr3:171791840-171851746 |
Sample_02_0590 | Cervix | HeLa Kyoto_Luci PWWP2A siRNA | 54 | 19 | 1647 | 123 | 9 | 132 | 212 | TMEM212,PLD1,TMEM212-AS1 |
| SE_02_125200306 | chr3:171829439-171853889 |
Sample_02_1252 | Bone marrow | RS4_11_DMSO_10h | 306 | 5 | 700 | 33 | 5 | 97 | 144 | TMEM212,TMEM212-AS1,PLD1 |
| SE_02_125000320 | chr3:171829922-171852890 |
Sample_02_1250 | Bone marrow | RS4_11_AZD1775 _4h | 320 | 4 | 659 | 33 | 5 | 83 | 85 | TMEM212,TMEM212-AS1,PLD1 |
| SE_02_062000109 | chr3:171830170-171875949 |
Sample_02_0620 | Aortic | Aortic Endothelial Cells_DF | 109 | 17 | 1323 | 58 | 5 | 134 | 383 | TMEM212,TMEM212-AS1,PLD1 |
| SE_02_125100389 | chr3:171830172-171853300 |
Sample_02_1251 | Bone marrow | RS4_11_AZD1775 _10h | 389 | 5 | 666 | 31 | 5 | 83 | 85 | TMEM212,TMEM212-AS1,PLD1 |
| SE_02_124900418 | chr3:171840554-171852985 |
Sample_02_1249 | Bone marrow | RS4_11_DMSO_4h | 418 | 2 | 357 | 12 | 2 | 45 | 85 | TMEM212,TMEM212-AS1,PLD1 |
| SE_02_062100045 | chr3:171860874-171875315 |
Sample_02_0621 | Aortic | Aortic Endothelial Cells_UF | 45 | 4 | 420 | 24 | 0 | 36 | 0 | TMEM212,TMEM212-AS1 |
| SE_02_103600018 | chr3:171929095-172086361 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 18 | 54 | 4210 | 68 | 9 | 14 | 293 | FNDC3B,TMEM212-AS1 |
| SE_02_049200377 | chr3:171930402-171983859 |
Sample_02_0492 | Pharyng | Detroit 562_LPS | 377 | 20 | 1454 | 9 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_050200042 | chr3:171930469-171995072 |
Sample_02_0502 | Blood | HL-60_PMA_16h | 42 | 23 | 1754 | 9 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_047400603 | chr3:171932424-171995993 |
Sample_02_0474 | Fibroblast | umbilical cord Fibroblast | 603 | 12 | 1716 | 8 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_152500042 | chr3:171932564-171968246 |
Sample_02_1525 | Stomach | N87 DMSO | 42 | 12 | 962 | 6 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_049100440 | chr3:171933508-171983798 |
Sample_02_0491 | Pharyng | Detroit 562-Control | 440 | 15 | 1362 | 7 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_094800146 | chr3:171933731-171968250 |
Sample_02_0948 | Pharyng | Detroit562 | 146 | 8 | 921 | 5 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_076201504 | chr3:171933747-171996624 |
Sample_02_0762 | Podocyte | podocyte_CTL | 1504 | 17 | 1687 | 7 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_074900678 | chr3:171934145-171968275 |
Sample_02_0749 | Mammary gland | HCC1599_GSI | 678 | 6 | 912 | 5 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_136500914 | chr3:171934221-171968310 |
Sample_02_1365 | Pancreas | AsPC1-untreated | 914 | 12 | 911 | 5 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_074800718 | chr3:171934239-171968401 |
Sample_02_0748 | Mammary gland | HCC1599_WO | 718 | 6 | 911 | 5 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_072400227 | chr3:171934553-171968109 |
Sample_02_0724 | Pancreatic duct | AsPC1_GFP_DOX | 227 | 10 | 903 | 5 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_071400074 | chr3:171934632-171968201 |
Sample_02_0714 | Pancreas | SUIT2_MTV | 74 | 10 | 901 | 5 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_070500380 | chr3:171934653-171968456 |
Sample_02_0705 | Pancreas | AsPC1 WT | 380 | 9 | 903 | 5 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_071600133 | chr3:171934739-171968643 |
Sample_02_0716 | Pancreas | SUIT2_GFP | 133 | 11 | 904 | 4 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_113200695 | chr3:171934948-171968701 |
Sample_02_1132 | Pancreas | KLM1 wt | 695 | 11 | 899 | 4 | 5 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_103501106 | chr3:171935053-171971843 |
Sample_02_1035 | Mammary gland | HCC70_Vehicle | 1106 | 22 | 1018 | 4 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_071700318 | chr3:171935057-171968604 |
Sample_02_0717 | Pancreas | HPAFII_GFP_DOX | 318 | 6 | 896 | 4 | 5 | 0 | 0 | TMEM212-AS1 |
| SE_02_070600161 | chr3:171935064-171968077 |
Sample_02_0706 | Pancreas | SUIT2 WT | 161 | 12 | 887 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_070900363 | chr3:171935071-171968277 |
Sample_02_0709 | Pancreas | hT85_organoid | 363 | 8 | 890 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_093001497 | chr3:171935119-171985099 |
Sample_02_0930 | Mid-gestation placenta | trophoblast__SynT | 1497 | 21 | 1368 | 5 | 4 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_151100172 | chr3:171935137-171968833 |
Sample_02_1511 | Lung | H3122_untreated | 172 | 9 | 900 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_072100241 | chr3:171935181-171968750 |
Sample_02_0721 | Pancreas | HPAFII_TP63dN_DOX | 241 | 10 | 898 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_072000463 | chr3:171935315-171967986 |
Sample_02_0720 | Pancreas | AsPC1_TP63dN_DOX | 463 | 8 | 881 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_098700706 | chr3:171935510-171980516 |
Sample_02_0987 | Blood | K562_Control_1 | 706 | 16 | 1246 | 4 | 4 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_071900565 | chr3:171935511-171968060 |
Sample_02_0719 | Pancreas | SUIT2_TP63dN_DOX | 565 | 8 | 883 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_137200516 | chr3:171935649-171972008 |
Sample_02_1372 | Pancreas | PSN1-untreated | 516 | 10 | 1016 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_152400289 | chr3:171935734-171970897 |
Sample_02_1524 | Lung | H3122 DMSO | 289 | 13 | 977 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_071201255 | chr3:171935802-171968091 |
Sample_02_0712 | Pancreas | BxPC3_sgNEG | 1255 | 8 | 878 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_060900499 | chr3:171936086-171978557 |
Sample_02_0609 | Liposarcoma | LPS141 | 499 | 13 | 1183 | 3 | 4 | 0 | 0 | TMEM212-AS1 |
| SE_02_153900747 | chr3:171936166-171970789 |
Sample_02_1539 | Nasopharyngeal | C666-1 | 747 | 12 | 964 | 3 | 3 | 0 | 0 | TMEM212-AS1 |
| SE_02_069800461 | chr3:171943499-171961673 |
Sample_02_0698 | Lung | NCI-H1048-cas9_sgPOU2F3 | 461 | 9 | 510 | 1 | 0 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_058800363 | chr3:171944142-171986630 |
Sample_02_0588 | Cervix | HeLa Kyoto_untreated | 363 | 10 | 1200 | 5 | 1 | 0 | 0 | TMEM212-AS1 |
| SE_02_056901018 | chr3:171950381-172006765 |
Sample_02_0569 | Periodontal ligament | mesenchymal stem cell | 1018 | 23 | 1558 | 7 | 1 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_045900465 | chr3:171950427-171987837 |
Sample_02_0459 | Blood | ME-1_DMSO_6h | 465 | 9 | 1032 | 5 | 1 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_117500770 | chr3:171950449-171985943 |
Sample_02_1175 | Brain | GBM03 | 770 | 14 | 994 | 5 | 1 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_097300476 | chr3:171950507-171961040 |
Sample_02_0973 | Brain | H3.3K27M-KO_BT245-c4p6-Rx_R2_cells | 476 | 3 | 276 | 1 | 0 | 0 | 0 | TMEM212-AS1 |
| SE_02_046000205 | chr3:171950586-171987884 |
Sample_02_0460 | Blood | ME-1_I-10-49_6h | 205 | 10 | 1033 | 5 | 1 | 0 | 0 | TMEM212-AS1,FNDC3B |
| SE_02_103300106 | chr3:171950655-171996573 |
Sample_02_1033 | Haematopoietic and lymphoid tissue bone marrow | K562 | 106 | 9 | 1251 | 5 | 1 | 0 | 0 | TMEM212-AS1,FNDC3B |
Genomic distribution of SEs associated with TMEM212-AS1