SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000141556
Gene: TBCD Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:82752065-82945914 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_028400149 chr17:82641061-82714173 Sample_02_0284 Pelvis patient 119 149 13 2587 377 2 80 1149 WDR45L,RAB40B,FN3KRP,FN3K,TBCD
SE_02_121300137 chr17:82648725-82713346 Sample_02_1213 Brain GBM31 137 17 2294 340 2 73 900 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_120500129 chr17:82650175-82713139 Sample_02_1205 Brain NB3 129 26 2236 327 1 73 900 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_117300083 chr17:82650628-82712999 Sample_02_1173 Brain GBM01 83 24 2218 324 1 73 900 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_00_004300555 chr17:82652609-82717549 Sample_00_0043 Stomach stomach_96d 555 13 2305 356 1 75 1081 FN3KRP,RAB40B,FN3K,TBCD,WDR45L
SE_00_004200388 chr17:82652646-82717561 Sample_00_0042 Stomach stomach_30y 388 15 2304 356 1 75 1081 FN3KRP,RAB40B,FN3K,TBCD,WDR45L
SE_02_120300177 chr17:82661969-82713752 Sample_02_1203 Brain NB1 177 12 1827 301 0 35 468 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_119600274 chr17:82662375-82708836 Sample_02_1196 Brain GBM32 274 25 1621 234 0 35 468 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_120400201 chr17:82663467-82713026 Sample_02_1204 Brain NB2 201 14 1746 275 0 35 468 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_035000111 chr17:82664302-82708164 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 111 20 1527 215 0 30 467 RAB40B,FN3KRP,FN3K,TBCD,WDR45L
SE_02_101300134 chr17:82664400-82703558 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 134 24 1336 175 0 28 435 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_119800367 chr17:82664466-82708689 Sample_02_1198 Brain GBM34 367 20 1530 219 0 35 413 MIR4525,RAB40B,FN3KRP,FN3K,WDR45B,TBCD
SE_02_077501380 chr17:82670366-82722302 Sample_02_0775 Pancreas EndoC-BH1_SE 1380 18 1781 289 0 34 767 FN3KRP,RAB40B,MIR4525,FN3K,WDR45B,TBCD
SE_02_082600946 chr17:82671040-82709853 Sample_02_0826 Stomach gastric tumor 946 20 1317 199 0 31 359 RAB40B,FN3KRP,MIR4525,FN3K,WDR45B,TBCD
SE_02_104901246 chr17:82680179-82732357 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1246 12 1851 307 2 48 1144 FN3KRP,RAB40B,MIR4525,FN3K,WDR45B,TBCD
SE_02_105100397 chr17:82683436-82704692 Sample_02_1051 Esophagus Eso26 397 6 745 101 0 19 359 RAB40B,FN3KRP,MIR4525,FN3K,WDR45B,TBCD
SE_02_117300912 chr17:82734575-82739802 Sample_02_1173 Brain GBM01 912 3 159 24 0 16 423 FN3K,FN3KRP,RAB40B,TBCD
SE_02_109500751 chr17:82734987-82739923 Sample_02_1095 Blood CD34 Erythroid cells_Don002 751 1 151 25 0 16 423 FN3K,FN3KRP,RAB40B,TBCD
Genomic distribution of SEs associated with TBCD
Genome Browser

The strength of the tissue affected by the gene

Expression of TBCD

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)