SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000115107
Gene: STEAP3 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:119223831-119265652 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_045300855 chr2:119153136-119176244 Sample_02_0453 Neuroblastoma SJNB3 855 6 702 36 2 88 683 C1QL2,STEAP3
SE_02_147900259 chr2:119174808-119199555 Sample_02_1479 Bone EW-7 259 12 751 51 4 26 42 STEAP3,C1QL2,STEAP3-AS1
SE_02_074100390 chr2:119177416-119219140 Sample_02_0741 Muscle RH30 390 10 1297 98 4 47 42 STEAP3,C1QL2,STEAP3-AS1
SE_02_143300378 chr2:119178057-119264449 Sample_02_1433 Bone A673 STAG2 null 378 38 2762 234 11 172 1170 STEAP3,STEAP3-AS1,C1QL2
SE_02_132000156 chr2:119178896-119259665 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 156 25 2590 219 11 157 904 STEAP3,STEAP3-AS1,C1QL2
SE_02_132200235 chr2:119178951-119256958 Sample_02_1322 Connective Tissue HT1080_WT 235 16 2486 209 11 149 805 STEAP3,STEAP3-AS1,C1QL2
SE_02_148000759 chr2:119179400-119199056 Sample_02_1480 Bone MHH-ES-1 759 4 607 44 2 21 42 STEAP3,C1QL2
SE_02_148300584 chr2:119179579-119199543 Sample_02_1483 Bone RD-ES 584 8 610 44 3 20 42 STEAP3,C1QL2,STEAP3-AS1
SE_02_106000576 chr2:119181055-119199182 Sample_02_1060 Bone TC71_SA2 KO 576 11 558 38 2 20 42 STEAP3,C1QL2,STEAP3-AS1
SE_02_076201875 chr2:119195929-119261291 Sample_02_0762 Podocyte podocyte_CTL 1875 10 2125 183 8 137 904 STEAP3,STEAP3-AS1,C1QL2
SE_02_068700864 chr2:119196151-119243114 Sample_02_0687 Lung NCI-H146_no infection 864 15 1524 132 2 72 376 STEAP3,C1QL2,STEAP3-AS1
SE_02_136200975 chr2:119198104-119256668 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 975 15 1881 167 8 125 763 STEAP3,STEAP3-AS1,C1QL2
SE_02_039601565 chr2:119204437-119263526 Sample_02_0396 Skin NHEK-D 1565 13 1942 176 7 131 972 STEAP3,C1QL2
SE_02_120000057 chr2:119207732-119261368 Sample_02_1200 Brain GBM36 57 20 1793 166 7 122 862 STEAP3,STEAP3-AS1,C1QL2
SE_02_076301105 chr2:119209260-119261588 Sample_02_0763 Podocyte podocyte_DEX 1105 9 1739 159 7 122 862 STEAP3,STEAP3-AS1
SE_02_118700089 chr2:119214265-119307680 Sample_02_1187 Brain GBM16 89 23 2851 317 9 218 1387 STEAP3,STEAP3-AS1,C2ORF76
SE_02_123900197 chr2:119214397-119252759 Sample_02_1239 Skin Waga_virus_positive 197 10 1263 117 7 95 671 STEAP3,STEAP3-AS1
SE_02_123800137 chr2:119214613-119251307 Sample_02_1238 Skin MS1_virus_positive 137 13 1209 108 5 95 671 STEAP3,STEAP3-AS1
SE_02_118300447 chr2:119214651-119260271 Sample_02_1183 Brain GBM12 447 14 1506 138 7 121 862 STEAP3,STEAP3-AS1
SE_02_060300712 chr2:119216646-119256626 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 712 7 1302 122 7 104 763 STEAP3,STEAP3-AS1
SE_02_101701737 chr2:119216903-119260015 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1737 8 1420 132 7 111 862 STEAP3,STEAP3-AS1
SE_02_136101133 chr2:119216998-119256431 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1133 12 1282 122 7 103 763 STEAP3,STEAP3-AS1
SE_02_046200168 chr2:119217199-119243924 Sample_02_0462 Lung NCI-H2171 cells 168 18 878 84 1 48 334 STEAP3,STEAP3-AS1
SE_02_053000887 chr2:119217255-119255784 Sample_02_0530 Mammary gland MCF10A 887 8 1253 118 7 92 763 STEAP3,STEAP3-AS1
SE_02_036800115 chr2:119217746-119320213 Sample_02_0368 Skeletal muscle NS134 115 16 3069 370 9 216 1467 STEAP3,C2ORF76,DBI
SE_02_147900185 chr2:119217782-119264587 Sample_02_1479 Bone EW-7 185 20 1531 142 7 125 1150 STEAP3,STEAP3-AS1
SE_02_158000220 chr2:119217934-119262039 Sample_02_1580 Renal 786-O 220 18 1442 132 7 113 862 STEAP3,STEAP3-AS1
SE_02_143201789 chr2:119218009-119264314 Sample_02_1432 Bone A673 STAG2 WT 1789 13 1512 138 7 125 1100 STEAP3,STEAP3-AS1
SE_02_132100459 chr2:119218141-119256964 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 459 12 1259 117 7 104 763 STEAP3,STEAP3-AS1
SE_02_045300798 chr2:119218197-119265964 Sample_02_0453 Neuroblastoma SJNB3 798 14 1553 143 7 126 1359 STEAP3,STEAP3-AS1
SE_02_114500359 chr2:119218504-119265358 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 359 19 1526 139 7 125 1297 STEAP3,STEAP3-AS1
SE_02_097900340 chr2:119218558-119291505 Sample_02_0979 Brain JN14-BS1_H3.3K27M 340 18 2258 232 8 147 1359 STEAP3,STEAP3-AS1
SE_02_066300784 chr2:119218613-119257756 Sample_02_0663 Thyroid TT 784 10 1285 121 7 104 829 STEAP3,STEAP3-AS1
SE_02_037200139 chr2:119222318-119244222 Sample_02_0372 Skeletal muscle RMS008 139 4 716 62 2 46 334 STEAP3
SE_02_036700494 chr2:119222954-119265583 Sample_02_0367 Skeletal muscle NS129 494 9 1392 119 7 120 1329 STEAP3
SE_02_025900182 chr2:119222958-119260200 Sample_02_0259 Lung NCI-H1299_EGFP-NEO_reporter_cells_SAHA 182 8 1232 107 7 107 862 STEAP3
SE_02_118600118 chr2:119223097-119315799 Sample_02_1186 Brain GBM15 118 20 2784 317 9 210 1446 STEAP3,STEAP3-AS1,C2ORF76
SE_02_043300357 chr2:119225287-119264576 Sample_02_0433 Lung NCI-H1299_EGFP-NEO_reporter_cells_DAC 357 6 1296 108 7 100 1009 STEAP3
SE_02_157900399 chr2:119225579-119262776 Sample_02_1579 Renal 786-M1A 399 13 1226 102 7 88 722 STEAP3,STEAP3-AS1
SE_02_050001167 chr2:119225641-119259833 Sample_02_0500 Fetal lung IMR90_#2 1167 14 1133 93 7 85 722 STEAP3,STEAP3-AS1
SE_02_026000112 chr2:119225771-119265466 Sample_02_0260 Lung NCI-H1299_EGFP-NEO_reporter_cells_SB939 112 11 1298 105 7 97 1174 STEAP3
SE_02_072700656 chr2:119225967-119261433 Sample_02_0727 Fetal lung IMR90_Etoposide 656 8 1170 93 7 85 722 STEAP3,STEAP3-AS1
SE_02_045100524 chr2:119226008-119260795 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 524 9 1146 93 7 84 722 STEAP3,STEAP3-AS1
SE_02_015800153 chr2:119228239-119257020 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 153 7 935 76 7 71 623 STEAP3
SE_02_110500626 chr2:119228304-119265115 Sample_02_1105 Brain NBL-S 626 13 1201 99 7 92 1098 STEAP3,STEAP3-AS1
SE_02_119500548 chr2:119229017-119292610 Sample_02_1195 Brain GBM29 548 22 1947 194 8 118 1219 STEAP3,STEAP3-AS1
SE_02_042200220 chr2:119229303-119260328 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 220 4 1031 86 7 78 722 STEAP3
SE_02_028100205 chr2:119229344-119257717 Sample_02_0281 Bone U2OS 205 3 937 79 7 70 686 STEAP3
SE_02_158400652 chr2:119229396-119257060 Sample_02_1584 Brain U87 GBM_Mock 652 4 904 75 7 70 623 STEAP3,STEAP3-AS1
SE_02_005400810 chr2:119229487-119257159 Sample_02_0054 Lung IMR-90_DMSO_1 810 4 902 75 7 70 623 STEAP3
SE_02_119100857 chr2:119229561-119265391 Sample_02_1191 Brain GBM25 857 10 1170 96 7 91 1165 STEAP3,STEAP3-AS1
SE_02_044000222 chr2:119229574-119262656 Sample_02_0440 Bone LM7 222 21 1087 90 7 80 722 STEAP3,STEAP3-AS1
SE_02_141500769 chr2:119229584-119256801 Sample_02_1415 Brain DIPGIV 769 7 891 73 7 70 623 STEAP3,STEAP3-AS1
SE_02_141800283 chr2:119229605-119256943 Sample_02_1418 Brain SF9427 283 5 893 73 7 70 623 STEAP3,STEAP3-AS1
SE_02_005500604 chr2:119229614-119257261 Sample_02_0055 Lung IMR-90_Nutlin-3a 604 4 905 76 7 70 623 STEAP3
SE_02_155200802 chr2:119229617-119257495 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 802 5 915 77 7 70 655 STEAP3,STEAP3-AS1
SE_02_041900826 chr2:119229665-119256864 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 826 11 886 72 7 70 623 STEAP3
SE_02_011200486 chr2:119229725-119257186 Sample_02_0112 Connective tissue HT1080_untreated 486 3 894 74 7 70 623 STEAP3
SE_02_086701322 chr2:119229866-119259918 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1322 18 990 80 7 77 722 STEAP3,STEAP3-AS1
SE_02_079600317 chr2:119229875-119257704 Sample_02_0796 Brain 2229 317 6 912 75 7 70 686 STEAP3,STEAP3-AS1
SE_02_141900525 chr2:119229919-119256624 Sample_02_1419 Brain hNSC 525 4 862 70 7 70 623 STEAP3,STEAP3-AS1
SE_02_018200757 chr2:119229931-119257056 Sample_02_0182 melanoma LOX-IMVI 757 5 880 72 7 70 623 STEAP3
SE_02_143800955 chr2:119229941-119260890 Sample_02_1438 Liver LSEC 955 10 1022 82 7 78 722 STEAP3,STEAP3-AS1
SE_02_016100455 chr2:119230024-119234058 Sample_02_0161 Brain U87 455 2 125 9 0 7 130 STEAP3
SE_02_143601095 chr2:119230197-119260217 Sample_02_1436 Liver LSEC-Ctrl 1095 7 995 79 7 78 722 STEAP3,STEAP3-AS1
SE_02_119900807 chr2:119230202-119257429 Sample_02_1199 Brain GBM35 807 6 892 72 7 70 646 STEAP3,STEAP3-AS1
SE_02_137700693 chr2:119230283-119256917 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 693 7 869 68 7 70 623 STEAP3,STEAP3-AS1
SE_02_045201153 chr2:119230309-119257054 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 1153 6 872 70 7 70 623 STEAP3,STEAP3-AS1
SE_02_030101243 chr2:119230484-119258829 Sample_02_0301 Neuroblastoma GIMEN 1243 3 939 74 7 70 716 STEAP3
SE_02_117400614 chr2:119230503-119259884 Sample_02_1174 Brain GBM02 614 9 974 78 7 76 713 STEAP3,STEAP3-AS1
SE_02_133400331 chr2:119230714-119259950 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 331 12 967 78 7 75 694 STEAP3,STEAP3-AS1
SE_02_096700525 chr2:119230791-119267854 Sample_02_0967 Brain H3.3K27M_JN57 525 11 1200 100 8 89 1179 STEAP3,STEAP3-AS1
SE_02_114200387 chr2:119230802-119257807 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 387 5 892 74 7 67 662 STEAP3,STEAP3-AS1
SE_02_133500139 chr2:119230838-119259928 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 139 10 964 78 7 74 667 STEAP3,STEAP3-AS1
SE_02_108500962 chr2:119231559-119256780 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 962 7 823 65 7 67 493 STEAP3,STEAP3-AS1
SE_02_126401411 chr2:119231591-119261872 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1411 10 996 77 7 75 592 STEAP3,STEAP3-AS1
SE_02_025800525 chr2:119231705-119260021 Sample_02_0258 Lung NCI-H1299_EGFP-NEO_reporter_cells_DMSO 525 4 930 75 7 73 592 STEAP3
SE_02_154101132 chr2:119231824-119256705 Sample_02_1541 Nasopharyngeal HNE1 1132 9 802 65 7 66 493 STEAP3,STEAP3-AS1
SE_02_126800789 chr2:119231908-119254352 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 789 3 724 59 7 52 401 STEAP3,STEAP3-AS1
SE_02_072500518 chr2:119232326-119255711 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 518 10 766 59 7 54 493 STEAP3,STEAP3-AS1
SE_02_133700193 chr2:119233834-119260034 Sample_02_1337 Lung NCI-H1299-wtSMARCA4_Dox_SAHA 193 8 871 71 7 71 592 STEAP3,STEAP3-AS1
SE_02_113400607 chr2:119234131-119256882 Sample_02_1134 Bone U2OS-interphase 607 6 751 61 7 63 493 STEAP3,STEAP3-AS1
SE_02_139800549 chr2:119238337-119257902 Sample_02_1398 Bone U2OS_siNC 549 7 644 62 7 60 592 STEAP3,STEAP3-AS1
SE_02_141000589 chr2:119238384-119307363 Sample_02_1410 Brain GSC6 589 15 2043 244 9 165 1117 STEAP3,STEAP3-AS1,C2ORF76
SE_02_085700972 chr2:119238494-119261371 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 972 5 761 68 7 69 592 STEAP3,STEAP3-AS1
SE_02_044100960 chr2:119239709-119261931 Sample_02_0441 Bone M112 960 6 724 62 6 69 528 STEAP3,STEAP3-AS1
SE_02_126501044 chr2:119239713-119262031 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 1044 4 728 63 6 69 528 STEAP3,STEAP3-AS1
SE_02_129200644 chr2:119239972-119256931 Sample_02_1292 Lung JHU-LX110-SCLC PDX 644 5 545 49 6 60 429 STEAP3,STEAP3-AS1
SE_00_002300722 chr2:119250977-119257145 Sample_00_0023 Embryo mesenchymal-stem-cell 722 1 189 23 4 18 92 STEAP3
SE_02_057201139 chr2:119251916-119259932 Sample_02_0572 Brain LN229_1_mM_glucose 1139 4 268 25 0 25 191 STEAP3,STEAP3-AS1
SE_02_057100987 chr2:119252216-119260373 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 987 7 270 25 0 26 191 STEAP3,STEAP3-AS1
SE_02_019700452 chr2:119257135-119261284 Sample_02_0197 Stomach SNU1750 452 3 154 10 0 9 99 STEAP3
Genomic distribution of SEs associated with STEAP3
Genome Browser

The strength of the tissue affected by the gene

Expression of STEAP3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)