SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000113739
Gene: STC2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:173314713-173329503 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_089700334 chr5:173217956-173290746 Sample_02_0897 Heart left ventricle_LV1325 334 14 2052 80 35 201 533 NKX2-5,STC2
SE_02_089600409 chr5:173218029-173279595 Sample_02_0896 Heart left ventricle_LV1294 409 12 1766 71 35 192 533 NKX2-5,STC2
SE_02_038200083 chr5:173224195-173292980 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 83 7 1916 69 21 210 533 NKX2-5,STC2
SE_02_092400022 chr5:173225238-173291470 Sample_02_0924 Heart fetal heart_PCW10_12569 22 20 1857 67 20 210 533 NKX2-5,STC2
SE_02_092500037 chr5:173225239-173291688 Sample_02_0925 Heart fetal heart_PCW17_12570 37 16 1860 67 20 210 533 NKX2-5,STC2
SE_01_002300008 chr5:173225923-173305211 Sample_01_0023 Embryo cardiac-muscle-cell 8 8 2285 73 23 213 533 NKX2-5,STC2
SE_02_038100058 chr5:173225969-173292861 Sample_02_0381 Heart purified cardiomyocyte WT 58 5 1870 64 20 210 533 NKX2-5,STC2
SE_01_008100194 chr5:173227108-173284409 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 194 6 1627 60 19 196 533 NKX2-5,STC2
SE_02_089300160 chr5:173228094-173283904 Sample_02_0893 Heart left ventricle_LV1226 160 12 1575 55 18 189 533 NKX2-5,STC2
SE_02_090400236 chr5:173228142-173290870 Sample_02_0904 Heart left ventricle_DCM_LV1028 236 14 1755 58 18 199 533 NKX2-5,STC2
SE_02_088900296 chr5:173228150-173290821 Sample_02_0889 Heart left ventricle_LV1183 296 10 1755 58 18 195 533 NKX2-5,STC2
SE_02_089800189 chr5:173228189-173283900 Sample_02_0898 Heart left ventricle_LV1356 189 14 1574 55 18 189 533 NKX2-5,STC2
SE_02_089200254 chr5:173228204-173283868 Sample_02_0892 Heart left ventricle_LV1215 254 16 1574 55 18 189 533 NKX2-5,STC2
SE_02_090600320 chr5:173228242-173283799 Sample_02_0906 Heart left ventricle_DCM_LV1072 320 14 1572 55 18 189 533 NKX2-5,STC2
SE_00_003400134 chr5:173228245-173291042 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 134 15 1756 58 18 204 533 NKX2-5,STC2
SE_02_089100178 chr5:173228316-173283737 Sample_02_0891 Heart left ventricle_LV1202 178 14 1569 55 18 189 533 NKX2-5,STC2
SE_02_089000254 chr5:173228368-173283462 Sample_02_0890 Heart left ventricle_LV1200 254 14 1560 54 18 187 533 NKX2-5,STC2
SE_02_090700384 chr5:173228400-173290792 Sample_02_0907 Heart left ventricle_DCM_LV1223 384 18 1751 58 18 195 533 NKX2-5,STC2
SE_00_005200113 chr5:173228437-173283823 Sample_00_0052 Heart left ventricle 3y 113 22 1570 55 18 189 533 NKX2-5,STC2
SE_01_009800166 chr5:173228450-173284299 Sample_01_0098 Heart left ventricle_51y 166 14 1586 57 18 190 533 NKX2-5,STC2
SE_02_088700306 chr5:173228454-173283424 Sample_02_0887 Heart left ventricle_LV1121 306 11 1559 54 18 187 533 NKX2-5,STC2
SE_00_004600152 chr5:173228468-173290835 Sample_00_0046 Heart right ventricle_34y 152 34 1749 58 18 195 533 NKX2-5,STC2
SE_02_090500355 chr5:173228490-173290922 Sample_02_0905 Heart left ventricle_DCM_LV1033 355 14 1747 58 18 201 533 NKX2-5,STC2
SE_02_091300350 chr5:173228504-173290638 Sample_02_0913 Heart left ventricle_DCM_LV1304 350 14 1744 58 18 191 533 NKX2-5,STC2
SE_00_005700097 chr5:173228511-173283874 Sample_00_0057 Heart right ventricle 3y 97 37 1566 55 18 189 533 NKX2-5,STC2
SE_02_090200196 chr5:173228548-173291091 Sample_02_0902 Heart left ventricle_LV1558 196 23 1748 58 18 204 533 NKX2-5,STC2
SE_02_090800841 chr5:173228621-173290663 Sample_02_0908 Heart left ventricle_DCM_LV1262 841 21 1740 58 18 192 533 NKX2-5,STC2
SE_02_091100296 chr5:173228687-173290624 Sample_02_0911 Heart left ventricle_DCM_LV1290 296 18 1737 57 17 191 533 NKX2-5,STC2
SE_02_090300215 chr5:173228709-173290949 Sample_02_0903 Heart left ventricle_DCM_LV1009 215 16 1740 57 17 203 533 NKX2-5,STC2
SE_02_091200638 chr5:173229045-173279848 Sample_02_0912 Heart left ventricle_DCM_LV1300 638 10 1449 45 15 185 533 NKX2-5,STC2
SE_02_088800297 chr5:173229052-173283149 Sample_02_0888 Heart left ventricle_LV1160 297 17 1530 50 15 186 533 NKX2-5,STC2
SE_02_092000374 chr5:173229077-173283750 Sample_02_0920 Heart left ventricle_DCM_LV1535 374 20 1543 51 15 188 533 NKX2-5,STC2
SE_02_090000449 chr5:173229340-173283719 Sample_02_0900 Heart left ventricle_LV1452 449 21 1533 48 13 188 533 NKX2-5,STC2
SE_02_090900385 chr5:173230205-173283829 Sample_02_0909 Heart left ventricle_DCM_LV1264 385 22 1514 44 11 188 533 NKX2-5,STC2
SE_02_074400593 chr5:173283109-173304241 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 593 3 620 15 2 20 0 NKX2-5,MIR8056,STC2
SE_02_055700828 chr5:173290148-173304812 Sample_02_0557 iPSCs WT hiPSC#1 828 3 456 10 2 16 0 MIR8056,STC2
SE_02_004500168 chr5:173290248-173306033 Sample_02_0045 Embryo endodermal CyT49_ES_D7 168 2 490 10 3 16 0 STC2
SE_00_004800359 chr5:173290289-173302302 Sample_00_0048 Embryo neuronal stem cell originated from H1 359 8 373 10 2 16 0 MIR8056,STC2
SE_02_055901038 chr5:173291837-173305236 Sample_02_0559 iPSCs FX52 iPSCs dC-T 1038 4 442 10 3 3 0 MIR8056,STC2
SE_02_093900364 chr5:173292662-173311191 Sample_02_0939 Mammary gland MDA-MB-231_control 364 6 592 9 3 15 0 MIR8056,STC2
SE_02_049300487 chr5:173301461-173305975 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 487 1 142 0 1 0 0 MIR8056,STC2
Genomic distribution of SEs associated with STC2
Genome Browser

The strength of the tissue affected by the gene

Expression of STC2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)