SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000236581
Gene: STARD13-AS Gene type: lncRNA
Strand: + External links:
Genomic region: chr13:33180401-33281584 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090500247 chr13:33106634-33236637 Sample_02_0905 Heart left ventricle_DCM_LV1033 247 33 3813 298 24 380 1111 STARD13,STARD13-AS
SE_02_106100003 chr13:33108419-33231878 Sample_02_1061 Bone TC71_WT 3 31 3660 289 23 371 1058 STARD13,STARD13-AS
SE_02_148800003 chr13:33108419-33231878 Sample_02_1488 Bone TC-71 3 31 3660 289 23 371 1058 STARD13,STARD13-AS
SE_02_106000001 chr13:33109332-33231546 Sample_02_1060 Bone TC71_SA2 KO 1 23 3606 287 23 366 1058 STARD13,STARD13-AS
SE_02_138900022 chr13:33122058-33266185 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 22 40 4214 343 26 365 680 STARD13,STARD13-AS
SE_02_098900608 chr13:33152137-33236119 Sample_02_0989 Kidney kidney cortex_WT 608 31 2357 161 14 197 215 STARD13,STARD13-AS
SE_02_120500957 chr13:33153203-33235278 Sample_02_1205 Brain NB3 957 18 2314 158 14 197 215 STARD13,STARD13-AS
SE_02_147800026 chr13:33153304-33231538 Sample_02_1478 Bone EW-3 26 15 2215 151 14 196 215 STARD13,STARD13-AS
SE_02_119900137 chr13:33153675-33252567 Sample_02_1199 Brain GBM35 137 33 2761 186 16 207 215 STARD13,STARD13-AS
SE_02_070200006 chr13:33154816-33231415 Sample_02_0702 Bone David_TC71 6 34 2165 147 14 191 215 STARD13,STARD13-AS
SE_02_092200506 chr13:33158620-33235790 Sample_02_0922 Heart fetal heart_PCW10_12434 506 18 2171 149 14 185 215 STARD13,STARD13-AS
SE_02_147600028 chr13:33164946-33237287 Sample_02_1476 Bone EW-1 28 27 2028 142 14 180 215 STARD13,STARD13-AS
SE_02_044500786 chr13:33166332-33231446 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 786 22 1843 129 14 175 183 STARD13,STARD13-AS
SE_02_148200004 chr13:33167099-33231635 Sample_02_1482 Bone POE 4 13 1824 130 14 175 183 STARD13,STARD13-AS
SE_02_128000027 chr13:33167138-33236451 Sample_02_1280 Bone Mesenchymal stem cells_SPC_mutation_ EF1 27 8 1937 136 14 177 183 STARD13,STARD13-AS
SE_02_147500016 chr13:33167552-33231319 Sample_02_1475 Bone CHLA-25 16 10 1805 127 14 175 160 STARD13,STARD13-AS
SE_02_143200256 chr13:33168196-33231669 Sample_02_1432 Bone A673 STAG2 WT 256 25 1794 125 14 171 131 STARD13,STARD13-AS
SE_01_010100497 chr13:33168209-33236606 Sample_01_0101 Pancreas pancreas_54y 497 24 1907 131 14 173 131 STARD13,STARD13-AS
SE_02_092400709 chr13:33168589-33235410 Sample_02_0924 Heart fetal heart_PCW10_12569 709 16 1874 129 14 167 131 STARD13,STARD13-AS
SE_02_156400013 chr13:33168799-33231470 Sample_02_1564 Gastrointestinal Stromal GIST-430 13 27 1766 122 14 167 131 STARD13,STARD13-AS
SE_02_148900050 chr13:33168853-33231513 Sample_02_1489 Bone TC-106 50 28 1762 122 14 167 131 STARD13,STARD13-AS
SE_02_145400157 chr13:33168913-33237479 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 157 14 1900 130 14 169 131 STARD13,STARD13-AS
SE_02_067100336 chr13:33168939-33231084 Sample_02_0671 Mammary gland breast cancer_DSG 336 18 1751 119 14 167 131 STARD13,STARD13-AS
SE_02_145500194 chr13:33168992-33237702 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 194 11 1902 130 14 169 131 STARD13,STARD13-AS
SE_02_154600022 chr13:33169227-33230945 Sample_02_1546 Gastrointestinal Stromal GIST-430/654 22 26 1734 118 14 167 131 STARD13,STARD13-AS
SE_02_148100090 chr13:33170716-33231453 Sample_02_1481 Bone MIC 90 19 1715 119 14 166 131 STARD13,STARD13-AS
SE_02_148400004 chr13:33171736-33231250 Sample_02_1484 Bone Rh1 4 14 1675 114 13 166 131 STARD13,STARD13-AS
SE_02_116200626 chr13:33172593-33228944 Sample_02_1162 Stomach YCC11 626 18 1595 107 12 145 131 STARD13,STARD13-AS
SE_01_011100289 chr13:33173763-33262948 Sample_01_0111 Brain SK-N-SH 289 26 2501 169 16 216 131 STARD13,STARD13-AS
SE_02_105900193 chr13:33174338-33231617 Sample_02_1059 Bone A673_WT 193 14 1625 114 12 160 131 STARD13,STARD13-AS
SE_02_147300196 chr13:33174338-33231617 Sample_02_1473 Bone A-673 196 14 1625 114 12 160 131 STARD13,STARD13-AS
SE_02_105800313 chr13:33174531-33236871 Sample_02_1058 Bone A673_SA2 Rescue 313 27 1741 120 12 162 131 STARD13,STARD13-AS
SE_02_139100403 chr13:33175262-33251931 Sample_02_1391 Peripheral blood FE-PD_ALK- 403 17 2132 139 13 173 131 STARD13,STARD13-AS
SE_02_063100056 chr13:33175846-33229159 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 56 9 1512 102 12 141 131 STARD13,STARD13-AS
SE_02_154200029 chr13:33176345-33230170 Sample_02_1542 Gastrointestinal Stromal GIST-T1 29 12 1528 107 12 158 131 STARD13,STARD13-AS
SE_02_062900086 chr13:33177044-33229260 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 86 8 1477 101 12 149 131 STARD13,STARD13-AS
SE_02_063000132 chr13:33177286-33230086 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 132 9 1493 106 12 156 131 STARD13,STARD13-AS
SE_02_156000859 chr13:33177533-33235895 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 859 15 1627 114 12 160 131 STARD13,STARD13-AS
SE_02_066900291 chr13:33179055-33229821 Sample_02_0669 Prostate prostate cancer_DSG 291 21 1436 103 12 145 131 STARD13,STARD13-AS
SE_02_155400695 chr13:33179523-33229294 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 695 13 1410 98 12 141 131 STARD13,STARD13-AS
SE_02_063400333 chr13:33181724-33230087 Sample_02_0634 Gastrointestinal Stromal GIST-48B_JQ1 333 15 1361 100 10 139 131 STARD13,STARD13-AS
SE_02_154900436 chr13:33182571-33230825 Sample_02_1549 Gastrointestinal Stromal GIST-430B 436 17 1357 96 8 143 131 STARD13,STARD13-AS
SE_02_097200688 chr13:33183011-33231815 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 688 9 1368 96 6 143 131 STARD13,STARD13-AS
SE_01_010900867 chr13:33183208-33236696 Sample_01_0109 Colon transverse colon_54y 867 23 1469 102 6 145 131 STARD13,STARD13-AS
SE_02_138000208 chr13:33183297-33258882 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 208 25 2091 139 9 179 131 STARD13,STARD13-AS
SE_02_053300503 chr13:33183320-33236559 Sample_02_0533 Blood vessel Circle of Willis_54y 503 24 1466 102 6 145 131 STARD13,STARD13-AS
SE_02_156800428 chr13:33183988-33252610 Sample_02_1568 Heart Cardiac progenitor cells 428 12 1892 128 8 157 131 STARD13,STARD13-AS
SE_02_071300201 chr13:33186161-33264624 Sample_02_0713 Pancreas BxPC3_sgTP63 201 19 2200 157 10 195 69 STARD13,STARD13-AS
SE_02_071200445 chr13:33186164-33230998 Sample_02_0712 Pancreas BxPC3_sgNEG 445 13 1250 91 6 138 68 STARD13,STARD13-AS
SE_02_047500477 chr13:33187698-33229231 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 477 11 1163 82 6 118 59 STARD13,STARD13-AS
SE_02_092100603 chr13:33187997-33262379 Sample_02_0921 Heart embryonic heart_CS22 603 20 2062 141 10 180 59 STARD13,STARD13-AS
SE_02_091900550 chr13:33188054-33236052 Sample_02_0919 Heart left ventricle_DCM_LV1532 550 20 1316 93 6 129 59 STARD13,STARD13-AS
SE_02_091700401 chr13:33188240-33236138 Sample_02_0917 Heart left ventricle_DCM_LV1433 401 19 1315 93 6 129 59 STARD13,STARD13-AS
SE_02_154800287 chr13:33188648-33261387 Sample_02_1548 Gastrointestinal Stromal GIST-226 287 19 2021 138 10 165 59 STARD13,STARD13-AS
SE_02_092900793 chr13:33190781-33228633 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 793 10 1070 77 6 107 59 STARD13,STARD13-AS
SE_02_136200276 chr13:33191466-33264782 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 276 23 2062 148 10 176 59 STARD13,STARD13-AS
SE_02_136000225 chr13:33194081-33264873 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 225 27 2006 142 10 169 59 STARD13,STARD13-AS
SE_02_071800585 chr13:33194540-33228656 Sample_02_0718 Pancreas PATU8988S_GFP_DOX 585 8 974 69 5 89 59 STARD13,STARD13-AS
SE_02_094800731 chr13:33194757-33236811 Sample_02_0948 Pharyng Detroit562 731 9 1165 83 5 111 59 STARD13,STARD13-AS
SE_02_080900299 chr13:33205379-33230468 Sample_02_0809 Mammary gland T47D Serum 299 6 686 61 1 79 59 STARD13,STARD13-AS
SE_02_093001159 chr13:33207088-33235170 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1159 11 758 68 1 72 0 STARD13,STARD13-AS
SE_02_143400397 chr13:33207457-33236307 Sample_02_1434 Trophoblast trophoblast stem cells 397 6 766 66 1 74 0 STARD13,STARD13-AS
SE_02_072600575 chr13:33207732-33236842 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 575 14 771 65 1 74 0 STARD13,STARD13-AS
SE_02_053200283 chr13:33207825-33230832 Sample_02_0532 Mammary gland T47D 283 19 623 55 1 72 0 STARD13,STARD13-AS
SE_02_070700728 chr13:33207899-33228656 Sample_02_0707 Pancreas BxPC3 WT 728 6 567 50 1 51 0 STARD13,STARD13-AS
SE_02_088000578 chr13:33213442-33253457 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 578 8 1045 68 3 74 0 STARD13,STARD13-AS
SE_02_063800405 chr13:33213477-33262048 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 405 17 1302 87 5 109 0 STARD13,STARD13-AS
SE_02_135600824 chr13:33213817-33262522 Sample_02_1356 Umbilical cord umbilical cord-derived mesenchymal stem cells_Young 824 8 1308 86 5 109 0 STARD13,STARD13-AS
SE_02_111000345 chr13:33213854-33262098 Sample_02_1110 Other HGrC1 345 15 1296 86 5 107 0 STARD13,STARD13-AS
SE_02_138800514 chr13:33222916-33265911 Sample_02_1388 Peripheral blood JB6_ALK+ 514 9 1182 90 5 95 0 STARD13,STARD13-AS
SE_02_141300493 chr13:33226732-33265057 Sample_02_1413 Muscle RH4_sgBRG1 493 9 1069 79 4 84 0 STARD13,STARD13-AS
SE_02_074000931 chr13:33227757-33235446 Sample_02_0740 Muscle RH3 931 2 191 17 0 26 0 STARD13,STARD13-AS
SE_02_141800545 chr13:33228432-33252913 Sample_02_1418 Brain SF9427 545 5 646 43 2 35 0 STARD13,STARD13-AS
SE_02_157100982 chr13:33228705-33259564 Sample_02_1571 Fibroblast Fibroblast cells 982 5 838 53 3 57 0 STARD13,STARD13-AS
SE_02_156901008 chr13:33228826-33252440 Sample_02_1569 Endothelial Endothelial cells 1008 4 621 40 1 35 0 STARD13,STARD13-AS
SE_02_127200791 chr13:33228830-33251944 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 791 12 609 36 1 34 0 STARD13,STARD13-AS
SE_02_063700377 chr13:33228921-33259537 Sample_02_0637 Fibroblast fibroblast_WT_GM07492 377 12 831 53 3 55 0 STARD13,STARD13-AS
SE_02_043900513 chr13:33250387-33271799 Sample_02_0439 Bone Hu09 513 7 661 63 7 63 0 STARD13,STARD13-AS
SE_02_147600223 chr13:33303636-33369087 Sample_02_1476 Bone EW-1 223 18 1784 63 4 129 200 STARD13,STARD13-AS
SE_02_084000427 chr13:33307552-33331026 Sample_02_0840 Embryo hNPCs_R1159Q/+ 427 7 659 22 2 81 0 STARD13,STARD13-AS
SE_02_145500768 chr13:33312356-33325311 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 768 3 361 14 2 52 0 STARD13,STARD13-AS
SE_02_145200993 chr13:33312832-33325297 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 993 2 345 14 2 43 0 STARD13,STARD13-AS
SE_02_141300214 chr13:33319724-33353930 Sample_02_1413 Muscle RH4_sgBRG1 214 5 865 38 1 74 200 STARD13,STARD13-AS
SE_02_147500560 chr13:33323128-33367694 Sample_02_1475 Bone CHLA-25 560 13 1167 40 1 72 200 STARD13,STARD13-AS
SE_02_106100446 chr13:33323544-33352061 Sample_02_1061 Bone TC71_WT 446 10 714 30 1 60 200 STARD13,STARD13-AS
SE_02_148800445 chr13:33323544-33352061 Sample_02_1488 Bone TC-71 445 10 714 30 1 60 200 STARD13,STARD13-AS
Genomic distribution of SEs associated with STARD13-AS
Genome Browser

The strength of the tissue affected by the gene

Expression of STARD13-AS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)