SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000244094
Gene: SPRR2F Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:153112121-153113516 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_152400523 chr1:153087325-153102439 Sample_02_1524 Lung H3122 DMSO 523 3 481 50 0 2 168 SPRR2E,SPRR2A,SPRR2C,SPRR2G,SPRR2B,SPRR2F,SPRR2D
SE_02_071201490 chr1:153097329-153102096 Sample_02_0712 Pancreas BxPC3_sgNEG 1490 3 123 17 0 0 0 SPRR2E,SPRR2A,SPRR2C,SPRR2G,SPRR2B,SPRR2F
SE_02_070700919 chr1:153098186-153101411 Sample_02_0707 Pancreas BxPC3 WT 919 2 97 13 0 0 0 SPRR2E,SPRR2A,SPRR2C,SPRR2G,SPRR2B,SPRR2F
SE_02_150900191 chr1:153098646-153102021 Sample_02_1509 Lung H3122_LR 191 3 90 12 0 0 0 SPRR2E,SPRR2A,SPRR2C,SPRR2G,SPRR2B,SPRR2F
SE_02_152400639 chr1:153116668-153123845 Sample_02_1524 Lung H3122 DMSO 639 3 203 22 0 0 0 SPRR2B,SPRR2E,SPRR2C,SPRR2F,SPRR2G
SE_02_127800434 chr1:153117379-153134582 Sample_02_1278 Chordoma UCH1_DMSO_48h 434 4 516 63 2 0 0 SPRR2E,LOC101928009,SPRR2G,SPRR2B,SPRR2F,SPRR2C
SE_02_086000738 chr1:153119629-153135802 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 738 7 473 58 2 0 0 SPRR2E,LOC101928009,SPRR2G,SPRR2B,SPRR2F,SPRR2C
SE_02_117200850 chr1:153120649-153136840 Sample_02_1172 Embryo H9 WT 850 4 467 55 2 0 0 SPRR2E,LOC101928009,SPRR2G,SPRR2B,SPRR2F,SPRR2C,SPRR3,SPRR2D,SPRR1B,PRR9,LELP1,SPRR2A
SE_02_151100528 chr1:153120797-153124553 Sample_02_1511 Lung H3122_untreated 528 3 128 11 0 0 0 SPRR2E,LOC101928009,SPRR2G,SPRR2B,SPRR2F,SPRR2C
SE_02_157000805 chr1:153121775-153136595 Sample_02_1570 iPSCs EiPSC 805 4 437 53 2 0 0 SPRR2E,LOC101928009,SPRR2F,SPRR2C,SPRR2G
SE_02_150900502 chr1:153122103-153124724 Sample_02_1509 Lung H3122_LR 502 1 92 7 0 0 0 SPRR2E,LOC101928009,SPRR2F,SPRR2C,SPRR2G
SE_02_156701095 chr1:153122326-153136573 Sample_02_1567 iPSCs CiPSC 1095 2 412 51 2 0 0 SPRR2E,LOC101928009,SPRR2F,SPRR2C,SPRR2G
SE_02_086100620 chr1:153122401-153135921 Sample_02_0861 iPSCs SAH_WT 620 5 394 49 2 0 0 SPRR2E,LOC101928009,SPRR2F,SPRR2C,SPRR2G
SE_02_067800545 chr1:153122510-153134554 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 545 6 372 47 2 0 0 SPRR2E,LOC101928009,SPRR2F,SPRR2C,SPRR2G
Genomic distribution of SEs associated with SPRR2F
Genome Browser

The strength of the tissue affected by the gene

Expression of SPRR2F

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)