Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000128487 |
| Gene: | SPECC1 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr17:20008865-20319026 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_104300423 | chr17:19828872-19970797 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 423 | 46 | 3791 | 221 | 19 | 236 | 1262 | AKAP10,ULK2,SPECC1 |
| SE_02_104900500 | chr17:19864091-19980374 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 500 | 51 | 3078 | 180 | 20 | 236 | 1181 | AKAP10,ULK2,SPECC1 |
| SE_02_104701148 | chr17:19898353-19980414 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 1148 | 24 | 2166 | 121 | 18 | 183 | 880 | AKAP10,ULK2,SPECC1 |
| SE_02_116200795 | chr17:19935366-19977806 |
Sample_02_1162 | Stomach | YCC11 | 795 | 19 | 1096 | 51 | 6 | 133 | 450 | AKAP10,SPECC1 |
| SE_01_009500393 | chr17:19936218-19960177 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 393 | 5 | 620 | 29 | 3 | 77 | 247 | AKAP10,SPECC1 |
| SE_02_101700717 | chr17:19938958-19988413 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 717 | 12 | 1309 | 65 | 8 | 123 | 464 | AKAP10,SPECC1 |
| SE_02_083800597 | chr17:19948165-19959502 |
Sample_02_0838 | Embryo | hNPCs_WT | 597 | 3 | 320 | 13 | 1 | 16 | 60 | AKAP10,SPECC1 |
| SE_02_057400711 | chr17:19972468-19979796 |
Sample_02_0574 | Blood | MOLM-13_sgNeg2 | 711 | 2 | 187 | 13 | 2 | 33 | 193 | AKAP10,SPECC1 |
| SE_02_058200755 | chr17:19975902-19980294 |
Sample_02_0582 | Blood | MOLM13_SIK3TQ_HG | 755 | 1 | 97 | 8 | 1 | 32 | 193 | AKAP10,SPECC1 |
| SE_02_087500276 | chr17:20006632-20128335 |
Sample_02_0875 | Peripheral blood | Peripheral blood-derived mast cells | 276 | 38 | 3359 | 426 | 52 | 95 | 407 | SPECC1,AKAP10 |
| SE_02_146800363 | chr17:20008520-20077381 |
Sample_02_1468 | Blood | HUDEP-2_WT | 363 | 18 | 1931 | 251 | 22 | 52 | 184 | SPECC1,AKAP10 |
| SE_03_001300692 | chr17:20057365-20068982 |
Sample_03_0013 | Lung | A549 | 692 | 1 | 345 | 58 | 5 | 6 | 0 | SPECC1 |
| SE_03_000500635 | chr17:20057476-20067638 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 635 | 1 | 310 | 54 | 5 | 6 | 0 | SPECC1 |
| SE_02_008100436 | chr17:20059011-20109838 |
Sample_02_0081 | Blood | Monocyte-derived_dendritic_cells | 436 | 10 | 1433 | 208 | 25 | 59 | 208 | SPECC1 |
| SE_02_026801025 | chr17:20059146-20067400 |
Sample_02_0268 | Kidney | A-498 | 1025 | 5 | 258 | 45 | 5 | 6 | 0 | SPECC1,AKAP10 |
| SE_02_120500209 | chr17:20059588-20137041 |
Sample_02_1205 | Brain | NB3 | 209 | 29 | 2097 | 268 | 42 | 74 | 287 | SPECC1 |
| SE_02_059400993 | chr17:20060340-20134799 |
Sample_02_0594 | iPSC-derived | neural progenitors | 993 | 12 | 2025 | 262 | 39 | 65 | 287 | SPECC1 |
| SE_02_096700117 | chr17:20062907-20126346 |
Sample_02_0967 | Brain | H3.3K27M_JN57 | 117 | 20 | 1725 | 226 | 35 | 63 | 287 | SPECC1 |
Genomic distribution of SEs associated with SPECC1