SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000171763
Gene: SPATA5L1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr15:45402336-45421415 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_010100200 chr15:45307359-45399700 Sample_01_0101 Pancreas pancreas_54y 200 41 2078 305 5 81 1098 GATM,SPATA5L1,C15ORF48,MIR147B,LOC101928414,SLC28A2
SE_01_010300129 chr15:45307389-45397446 Sample_01_0103 Pancreas pancreas_37y 129 34 2038 301 5 81 1056 GATM,SPATA5L1,C15ORF48,MIR147B,LOC101928414,SLC28A2
SE_00_001400390 chr15:45342305-45403942 Sample_00_0014 Heart left ventricle heart-left-ventricle 390 10 1370 227 5 119 1514 LOC145663,GATM,SPATA5L1,C15ORF48,MIR147B
SE_00_002000602 chr15:45361070-45451620 Sample_00_0020 Large intestine large-intestine_108d 602 14 2149 297 7 163 2139 C15ORF48,LOC145663,SPATA5L1,MIR147B,GATM
SE_02_096700923 chr15:45364025-45399658 Sample_02_0967 Brain H3.3K27M_JN57 923 7 729 91 1 80 953 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_121300792 chr15:45367062-45399722 Sample_02_1213 Brain GBM31 792 15 653 85 1 80 855 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_035000363 chr15:45368011-45403203 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 363 10 723 95 1 104 1156 LOC145663,GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_120301033 chr15:45368248-45395558 Sample_02_1203 Brain NB1 1033 9 548 71 1 77 717 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_119600984 chr15:45368289-45400085 Sample_02_1196 Brain GBM32 984 19 642 82 1 80 831 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_120501182 chr15:45369336-45396148 Sample_02_1205 Brain NB3 1182 11 528 70 1 80 674 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_117300940 chr15:45369512-45396903 Sample_02_1173 Brain GBM01 940 11 544 72 1 75 676 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_119300976 chr15:45369635-45379278 Sample_02_1193 Brain GBM27 976 5 191 26 0 34 471 GATM,SPATA5L1
SE_02_096900669 chr15:45369740-45390255 Sample_02_0969 Brain H3.3K27M_PL637 669 5 402 50 0 55 639 GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_117900568 chr15:45369742-45379185 Sample_02_1179 Brain GBM08 568 4 187 25 0 34 459 GATM,SPATA5L1
SE_02_121200705 chr15:45370018-45379403 Sample_02_1212 Brain GBM30 705 4 190 25 0 34 476 GATM,SPATA5L1
SE_02_121100413 chr15:45370076-45395667 Sample_02_1211 Brain GBM21 413 11 507 66 1 74 639 GATM,SPATA5L1,C15ORF48,MIR147B
SE_00_003600544 chr15:45371242-45403849 Sample_00_0036 Small intestine small-intestine_108days 544 7 683 92 1 114 1162 LOC145663,GATM,SPATA5L1,C15ORF48,MIR147B
SE_02_025700508 chr15:45412974-45458436 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 508 6 1198 178 5 39 528 C15ORF48,SPATA5L1,MIR147B,GATM,LOC145663
SE_01_010900695 chr15:45428281-45458896 Sample_01_0109 Colon transverse colon_54y 695 15 872 146 3 38 314 C15ORF48,MIR147B,SPATA5L1,GATM
SE_02_008600256 chr15:45428283-45459479 Sample_02_0086 Pancreas CAPAN1 256 3 884 147 3 38 314 C15ORF48,MIR147B,GATM,SPATA5L1,LOC145663
SE_02_071300625 chr15:45428308-45458136 Sample_02_0713 Pancreas BxPC3_sgTP63 625 7 851 144 3 38 314 C15ORF48,MIR147B,SPATA5L1,GATM
SE_02_088401069 chr15:45428318-45458852 Sample_02_0884 Colon LoVo 1069 7 870 146 3 38 314 C15ORF48,MIR147B,SPATA5L1,GATM
SE_02_067400423 chr15:45428366-45458094 Sample_02_0674 Endometrium E1_FA 423 9 850 144 3 38 314 C15ORF48,MIR147B,SPATA5L1,GATM
SE_02_081900105 chr15:45428367-45459042 Sample_02_0819 Ovary Mucinous ovarian cancer 105 7 873 146 3 38 314 C15ORF48,MIR147B,SPATA5L1,GATM
SE_00_003500493 chr15:45429207-45457587 Sample_00_0035 Sigmoid colon sigmoid-colon 493 14 813 139 3 38 314 C15ORF48,MIR147B,SPATA5L1
SE_02_023700733 chr15:45429831-45458214 Sample_02_0237 Colon V389 733 12 818 140 3 37 314 C15ORF48,MIR147B,SPATA5L1
SE_02_125800119 chr15:45430025-45458076 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 119 3 810 138 3 37 314 C15ORF48,MIR147B,SPATA5L1
SE_02_047700257 chr15:45430050-45458091 Sample_02_0477 Colon intestinal epithelial organoids_139a 257 9 810 138 3 37 314 C15ORF48,MIR147B,SPATA5L1,SLC30A4,C15orf48
SE_02_047800244 chr15:45430100-45458154 Sample_02_0478 Colon normal colon mucosa 244 14 812 138 3 37 314 C15ORF48,MIR147B,SPATA5L1,SLC30A4,C15orf48
SE_02_008100186 chr15:45430240-45469933 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 186 6 1050 168 3 44 314 C15ORF48,MIR147B,SPATA5L1,C15ORF21
SE_02_023600180 chr15:45430444-45457424 Sample_02_0236 Colon V206 180 12 784 135 3 37 281 C15ORF48,MIR147B,SPATA5L1
SE_02_024200889 chr15:45434533-45458417 Sample_02_0242 Colon V481 889 6 694 115 2 24 68 SPATA5L1,C15ORF48,MIR147B
SE_00_005600779 chr15:45434785-45461732 Sample_00_0056 Sigmoid colon sigmoid colon 3y 779 25 768 124 2 26 68 SPATA5L1,C15ORF48,MIR147B,HMGN2P46
SE_02_105100163 chr15:45434797-45458136 Sample_02_1051 Esophagus Eso26 163 12 679 114 2 24 68 SPATA5L1,C15ORF48,MIR147B
SE_01_009900468 chr15:45434901-45458122 Sample_01_0099 Colon transverse colon 468 15 676 114 2 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_061900377 chr15:45436432-45458111 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 377 5 624 102 2 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_150900338 chr15:45437913-45458116 Sample_02_1509 Lung H3122_LR 338 10 586 91 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_135101090 chr15:45437937-45458148 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 1090 5 587 91 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_067200639 chr15:45437983-45458095 Sample_02_0672 Endometrium endometrium cancer_DSG 639 9 582 90 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_135300513 chr15:45438031-45458140 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 513 4 582 90 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_092901109 chr15:45438035-45458067 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1109 14 579 90 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_064300140 chr15:45438073-45458120 Sample_02_0643 Mammary gland MDA-MB-436 140 11 576 90 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_136700264 chr15:45438075-45458181 Sample_02_1367 Pancreas Capan1-untreated 264 10 578 90 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_135400946 chr15:45438079-45458142 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 946 5 576 90 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_093001503 chr15:45438088-45457629 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1503 20 560 89 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_064200163 chr15:45438262-45458117 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 163 9 568 89 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_049200443 chr15:45438301-45458629 Sample_02_0492 Pharyng Detroit 562_LPS 443 6 580 89 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_082600568 chr15:45438730-45457310 Sample_02_0826 Stomach gastric tumor 568 21 540 84 1 23 68 SPATA5L1,C15ORF48,MIR147B
SE_02_010100676 chr15:45438742-45458481 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 676 3 563 86 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_042800515 chr15:45439312-45458763 Sample_02_0428 Kidney 12364284_VHL- 515 6 558 85 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_076201359 chr15:45439615-45459482 Sample_02_0762 Podocyte podocyte_CTL 1359 7 564 83 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_043000374 chr15:45439658-45458122 Sample_02_0430 Kidney 12364284 374 6 531 80 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_042900338 chr15:45439917-45458013 Sample_02_0429 Kidney 12364284_VHL+ 338 5 520 79 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_151300294 chr15:45441298-45458173 Sample_02_1513 Lung Transitional AT2->1 cells 294 5 487 70 1 24 68 SPATA5L1,C15ORF48,MIR147B,C15orf48
SE_02_151400173 chr15:45441326-45458204 Sample_02_1514 Lung Differentiated AT1-like cells 173 5 488 70 1 24 68 SPATA5L1,C15ORF48,MIR147B,C15orf48
SE_02_074800995 chr15:45441482-45458651 Sample_02_0748 Mammary gland HCC1599_WO 995 7 494 70 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_151100305 chr15:45441558-45458104 Sample_02_1511 Lung H3122_untreated 305 5 478 69 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_046900294 chr15:45441786-45457977 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 294 7 470 69 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_158100247 chr15:45441965-45458121 Sample_02_1581 Renal OS-LM1 247 3 469 68 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_047401354 chr15:45442452-45458616 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1354 3 465 67 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_111101190 chr15:45442475-45458938 Sample_02_1111 Other HGrC1_SMAD2/3KO 1190 12 473 68 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_010300309 chr15:45444261-45458331 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 309 2 408 58 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_010200605 chr15:45444464-45470350 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 605 3 640 88 1 31 68 SPATA5L1,C15ORF21,C15ORF48,MIR147B
SE_02_041500185 chr15:45444489-45458075 Sample_02_0415 Stomach YCC22 185 5 391 58 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_153300441 chr15:45444510-45458071 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 441 3 388 58 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_094800647 chr15:45444696-45458218 Sample_02_0948 Pharyng Detroit562 647 2 388 57 1 24 68 SPATA5L1,C15ORF48,MIR147B,SLC30A4,C15orf48
SE_02_149600374 chr15:45444724-45469656 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 374 13 616 87 1 31 68 SPATA5L1,C15ORF48,MIR147B,HMGN2P46
SE_02_125400375 chr15:45444741-45457539 Sample_02_1254 Bladder Bladder tumor Basal1 375 2 367 55 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_151200487 chr15:45444804-45457531 Sample_02_1512 Lung Purified AT2 cells 487 3 367 55 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_149500142 chr15:45444827-45458061 Sample_02_1495 Other monocyte-derived dendritic cells_R848_1h 142 13 380 57 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_123000480 chr15:45444938-45458109 Sample_02_1230 Lung PC9 480 7 377 56 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_104602217 chr15:45445002-45466145 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2217 11 536 71 1 26 68 SPATA5L1,C15ORF48,MIR147B,HMGN2P46
SE_02_064800785 chr15:45445088-45458156 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 785 11 374 54 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_105200217 chr15:45445121-45458056 Sample_02_1052 Esophagus JH-EsoAd1 217 13 369 54 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_126200919 chr15:45445158-45458119 Sample_02_1262 Bone Im-GCT-3504_G34W 919 5 368 54 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_064400283 chr15:45445160-45458270 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 283 10 372 54 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_065000707 chr15:45445262-45458937 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 707 9 385 55 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_064900527 chr15:45445310-45458106 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 527 9 362 52 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_064500662 chr15:45445328-45458518 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 662 7 372 53 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_064701372 chr15:45445805-45458117 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1372 8 341 50 1 24 68 SPATA5L1,C15ORF48,MIR147B
SE_02_064600747 chr15:45448316-45458778 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 747 7 288 38 1 15 68 SPATA5L1,C15ORF48,MIR147B
SE_02_014700167 chr15:45448431-45457972 Sample_02_0147 Blood CD4_T_cells 167 3 264 35 1 14 68 SPATA5L1,C15ORF48,MIR147B
SE_02_065700222 chr15:45449374-45458050 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 222 6 240 33 1 13 68 SPATA5L1,C15ORF48,MIR147B
SE_02_140600021 chr15:45450248-45554037 Sample_02_1406 Prostate LNCaP_EtOH_vehicle_4h 21 30 2295 188 2 147 1466 HMGN2P46,SLC30A4,SPATA5L1,C15ORF48,BLOC1S6,MIR147B
Genomic distribution of SEs associated with SPATA5L1
Genome Browser

The strength of the tissue affected by the gene

Expression of SPATA5L1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)