Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000147164
Gene: SNX12 Gene type: protein_coding
Strand: - External links:
Genomic region: chrX:71056332-71073426 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_037300226 chrX:71095116-71109544 Sample_02_0373 Skeletal muscle RMS206 226 2 236 14 0 253 1713 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_00_004700261 chrX:71097956-71113128 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 261 4 261 12 0 200 1753 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_01_002500353 chrX:71098372-71114090 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 353 4 270 12 0 193 1753 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_017600830 chrX:71098391-71114524 Sample_02_0176 Peripheral blood LOUCY 830 2 274 13 0 193 1753 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_111200404 chrX:71098649-71113908 Sample_02_1112 T lymphocyte THP-6 T-ALL 404 3 263 12 0 186 1753 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_031900794 chrX:71098654-71111811 Sample_02_0319 Neuroblastoma NB-EBc1 794 2 220 10 0 178 1746 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_082601250 chrX:71099887-71116246 Sample_02_0826 Stomach gastric tumor 1250 7 297 14 0 185 1753 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_022500183 chrX:71100392-71114169 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 183 2 243 9 0 185 1753 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_022100236 chrX:71100591-71113765 Sample_02_0221 Blood CCRF-CEM 236 1 233 9 0 185 1736 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_01_004300531 chrX:71100684-71114400 Sample_01_0043 Blood KOPT-K1 531 1 238 10 0 185 1717 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_111900253 chrX:71100913-71114138 Sample_02_1119 Blood KBM7 253 1 235 9 0 177 1668 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_00_000700358 chrX:71101070-71114344 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 358 1 233 9 0 173 1639 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_01_004400704 chrX:71101258-71114059 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 704 1 227 9 0 164 1607 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_152700569 chrX:71101299-71109056 Sample_02_1527 Embryo naive embryonic stem cell 569 5 133 6 0 140 1202 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_00_000900332 chrX:71101518-71114331 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 332 1 228 9 0 160 1540 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_134000604 chrX:71101576-71113882 Sample_02_1340 Blood acute myeloid leukemia 604 2 221 9 0 159 1523 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_003100547 chrX:71101718-71114159 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 547 1 225 9 0 155 1504 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_00_000800349 chrX:71101772-71114195 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 349 1 225 9 0 155 1495 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_00_002700509 chrX:71102248-71114206 Sample_00_0027 Blood natural-killer-cell 509 1 217 8 0 145 1401 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_01_002000720 chrX:71102291-71114173 Sample_01_0020 Blood B-cell 720 2 217 8 0 144 1388 CXORF65,FOXO4,IL2RG,MED12,SNX12,NLGN3
SE_02_122100853 chrX:71102362-71113843 Sample_02_1221 Bone marrow KMS11 853 2 211 8 0 137 1371 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_068200408 chrX:71102418-71113247 Sample_02_0682 Blood Kasumi-1 408 1 201 8 0 133 1366 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_121600392 chrX:71102865-71113316 Sample_02_1216 Blood Jurkat ZBTB1 KO 392 2 195 8 0 121 1296 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_121700410 chrX:71102873-71113261 Sample_02_1217 Blood Jurkat ZBTB1 KO_ZBTB1_expressing FLAG-ZBTB1_Asparagine deprivation 410 3 195 8 0 121 1295 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3
SE_02_121500427 chrX:71102881-71113263 Sample_02_1215 Blood Jurkat ZBTB1 KO_Asparagine deprivation 427 2 195 8 0 121 1295 CXORF65,FOXO4,IL2RG,SNX12,MED12,NLGN3

Genomic distribution of SEs associated with SNX12

The strength of the tissue affected by the gene


Expression of SNX12