Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000128739 |
| Gene: | SNRPN | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr15:24823637-24978723 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_075200397 | chr15:24756394-24788663 |
Sample_02_0752 | Embryo | ES-derived progenitors_DE_wild type | 397 | 6 | 985 | 36 | 3 | 0 | 0 | SNRPN |
| SE_02_157200212 | chr15:24834462-24900390 |
Sample_02_1572 | iPSCs | FiPSC | 212 | 11 | 2110 | 96 | 8 | 0 | 114 | SNRPN |
| SE_02_157000204 | chr15:24845227-24900373 |
Sample_02_1570 | iPSCs | EiPSC | 204 | 12 | 1795 | 70 | 8 | 0 | 114 | SNRPN |
| SE_02_117200657 | chr15:24845276-24863585 |
Sample_02_1172 | Embryo | H9 WT | 657 | 4 | 564 | 47 | 4 | 0 | 58 | SNRPN |
| SE_02_145700322 | chr15:24845534-24860396 |
Sample_02_1457 | Embryo | HUES8 WT | 322 | 2 | 436 | 39 | 3 | 0 | 58 | SNRPN |
| SE_02_156700545 | chr15:24845619-24860093 |
Sample_02_1567 | iPSCs | CiPSC | 545 | 3 | 424 | 39 | 3 | 0 | 58 | SNRPN |
| SE_02_067600238 | chr15:24845690-24873255 |
Sample_02_0676 | Embryo | H1 hESC-derived neural progenitor cells_Smad_3hr | 238 | 10 | 878 | 49 | 5 | 0 | 58 | SNRPN,IPW,PAR-SN,PAR5,SNORD107,SNORD115-16,SNORD115-23,SNORD115-30,SNORD115-32,SNORD115-38,SNORD115-39,SNORD115-40,SNORD115-4,SNORD115-8,SNORD116-11,SNORD116-12,SNORD116-13,SNORD116-14,SNORD116-16,SNORD116-18,SNORD116-1,SNORD116-20,SNORD116-21,SNORD116-22,SNORD |
| SE_02_086100615 | chr15:24845824-24859876 |
Sample_02_0861 | iPSCs | SAH_WT | 615 | 4 | 413 | 38 | 3 | 0 | 58 | SNRPN |
| SE_02_101701695 | chr15:24846643-24880557 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1695 | 6 | 1096 | 55 | 6 | 0 | 58 | SNRPN |
| SE_02_056000413 | chr15:24847330-24863568 |
Sample_02_0560 | iPSCs | FX52_Cas9-inactive Tet1_CGG sgRNA | 413 | 6 | 501 | 45 | 4 | 0 | 58 | SNRPN |
| SE_01_009500328 | chr15:24847760-24862570 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 328 | 4 | 444 | 42 | 4 | 0 | 58 | SNRPN |
| SE_02_083800352 | chr15:24856640-24860089 |
Sample_02_0838 | Embryo | hNPCs_WT | 352 | 1 | 94 | 13 | 2 | 0 | 7 | SNRPN |
| SE_02_074501171 | chr15:24857514-24863316 |
Sample_02_0745 | Embryo | ES derived cardiac progenitor cells_day7 | 1171 | 3 | 169 | 16 | 1 | 0 | 0 | SNRPN |
| SE_02_074601232 | chr15:24857536-24865559 |
Sample_02_0746 | Embryo | ES derived primitive cardiomyocite_day15 | 1232 | 5 | 246 | 17 | 1 | 0 | 0 | SNRPN |
| SE_02_074400906 | chr15:24857586-24859974 |
Sample_02_0744 | Embryo | ES derived cardiac mesoderm_day5 | 906 | 2 | 62 | 10 | 0 | 0 | 0 | SNRPN |
| SE_02_004200511 | chr15:24949574-24958320 |
Sample_02_0042 | Embryo endodermal | CyT49_ES_D0 | 511 | 2 | 262 | 15 | 2 | 0 | 181 | SNRPN,SNURF,SNORD64,SNORD107,PAR5,SNORD108 |
| SE_02_003601446 | chr15:24949611-24958325 |
Sample_02_0036 | Embryo | H7 | 1446 | 3 | 262 | 15 | 2 | 0 | 181 | SNRPN,SNURF,SNORD64,SNORD107,PAR5,SNORD108 |
| SE_02_012500634 | chr15:24950209-24958985 |
Sample_02_0125 | Embryo | Embryonic-stem-cells_Primed | 634 | 1 | 265 | 15 | 2 | 0 | 238 | SNRPN,SNURF,SNORD64,SNORD107,PAR5,SNORD108 |
| SE_01_003300537 | chr15:24950293-24957939 |
Sample_01_0033 | Embryo | H9 | 537 | 2 | 233 | 14 | 2 | 0 | 181 | SNRPN,SNURF,SNORD64,SNORD107,PAR5,SNORD108 |
Genomic distribution of SEs associated with SNRPN