SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000209042
Gene: SNORD12C Gene type: snoRNA
Strand: + External links:
Genomic region: chr20:49278940-49279028 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_037000259 chr20:49217580-49246949 Sample_02_0370 Skeletal muscle RH4 259 3 797 117 8 97 1497 ZNFX1,DDX27,SNORD12B,SNORD12,STAU1,SNORD12C,NCRNA00275
SE_02_104701910 chr20:49225515-49275079 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1910 25 1289 198 9 243 2527 DDX27,ZNFX1,SNORD12C,ZFAS1,SNORD12B,SNORD12,STAU1
SE_02_103602515 chr20:49227844-49275588 Sample_02_1036 Mammary gland HCC70_XY018 2515 23 1229 190 9 240 2446 DDX27,ZNFX1,SNORD12C,ZFAS1,SNORD12B,SNORD12,STAU1
SE_02_074000719 chr20:49228256-49235016 Sample_02_0740 Muscle RH3 719 2 173 26 1 34 351 DDX27,SNORD12C,ZFAS1,SNORD12B,SNORD12,ZNFX1,STAU1
SE_02_064500824 chr20:49275180-49278546 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 824 2 81 11 0 33 254 ZFAS1,ZNFX1,SNORD12C,SNORD12B,SNORD12
SE_02_064400316 chr20:49275206-49278535 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 316 2 78 11 0 33 254 ZFAS1,ZNFX1,SNORD12C,SNORD12B,SNORD12
SE_02_064900579 chr20:49275321-49278096 Sample_02_0649 Tracheobronchial epithelial HTBE_H3N2_06h 579 1 60 7 0 11 123 ZNFX1,SNORD12C,ZFAS1,SNORD12B,SNORD12
SE_02_064800750 chr20:49275451-49278570 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 750 1 78 11 0 33 261 ZFAS1,ZNFX1,SNORD12C,SNORD12B,SNORD12
SE_02_065700423 chr20:49276014-49278125 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 423 1 40 5 0 17 80 ZNFX1,SNORD12C,ZFAS1,SNORD12B,SNORD12
SE_00_001300312 chr20:49282393-49291511 Sample_00_0013 Embryo H9 312 4 302 46 1 0 66 NCRNA00275,SNORD12B,SNORD12,ZNFX1,SNORD12C
SE_02_104601396 chr20:49297536-49436011 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1396 29 3633 357 34 201 1061 KCNB1,SNORD12C,ZFAS1,SNORD12B,SNORD12,ZNFX1
SE_02_120500061 chr20:49313796-49484813 Sample_02_1205 Brain NB3 61 77 4509 358 39 320 1448 KCNB1,SNORD12C,ZFAS1,SNORD12B,SNORD12,ZNFX1
SE_02_044300126 chr20:49323952-49405444 Sample_02_0443 Bone MG63 126 42 2150 191 18 155 1061 KCNB1,SNORD12C,ZFAS1,SNORD12B,SNORD12,ZNFX1
Genomic distribution of SEs associated with SNORD12C
Genome Browser

The strength of the tissue affected by the gene

Expression of SNORD12C

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)