SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000136856
Gene: SLC2A8 Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:127397138-127408424 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090800328 chr9:127223276-127354347 Sample_02_0908 Heart left ventricle_DCM_LV1262 328 45 2957 244 14 283 1173 GARNL3,SLC2A8
SE_02_089600483 chr9:127223820-127353107 Sample_02_0896 Heart left ventricle_LV1294 483 37 2916 240 14 281 1047 GARNL3,SLC2A8
SE_02_090300226 chr9:127224002-127353092 Sample_02_0903 Heart left ventricle_DCM_LV1009 226 42 2910 240 14 281 1047 GARNL3,SLC2A8
SE_02_091300215 chr9:127224120-127370805 Sample_02_0913 Heart left ventricle_DCM_LV1304 215 48 3366 313 17 300 1565 GARNL3,SLC2A8
SE_02_091000558 chr9:127224234-127352252 Sample_02_0910 Heart left ventricle_DCM_LV1275 558 33 2893 237 14 279 1047 GARNL3,SLC2A8
SE_02_091200244 chr9:127244624-127359873 Sample_02_0912 Heart left ventricle_DCM_LV1300 244 39 2658 233 14 210 1369 GARNL3,SLC2A8
SE_02_089800450 chr9:127244679-127351135 Sample_02_0898 Heart left ventricle_LV1356 450 31 2454 209 14 191 1047 GARNL3,SLC2A8
SE_02_091400619 chr9:127309274-127351203 Sample_02_0914 Heart left ventricle_DCM_LV1342 619 16 1007 97 10 91 845 GARNL3,SLC2A8
SE_02_129200533 chr9:127347915-127354320 Sample_02_1292 Lung JHU-LX110-SCLC PDX 533 6 147 16 2 15 173 GARNL3,SLC2A8
SE_01_004200210 chr9:127384426-127397126 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 210 3 309 32 1 38 460 GARNL3,SLC2A8,ZNF79
SE_02_028600605 chr9:127386562-127396939 Sample_02_0286 Liver HuH7_IL-1alpha_1h 605 2 243 23 1 29 345 GARNL3,SLC2A8,ZNF79
SE_02_042200489 chr9:127443799-127454081 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 489 1 295 32 2 29 937 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_021200111 chr9:127443808-127452928 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 111 1 264 23 1 28 937 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_040300337 chr9:127445681-127453708 Sample_02_0403 Mammary gland T-47D_untreat 337 1 232 24 1 29 729 SNORA65,LRSAM1,RPL12,ZNF79,SLC2A8
SE_02_003600956 chr9:127445916-127452512 Sample_02_0036 Embryo H7 956 1 195 19 0 27 729 LRSAM1,RPL12,SNORA65,ZNF79,SLC2A8
SE_02_138100677 chr9:127446270-127452323 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 677 1 181 16 0 27 685 RPL12,LRSAM1,SNORA65,SLC2A8,ZNF79
SE_02_032800425 chr9:127446732-127453271 Sample_02_0328 Embryo H9_naive 425 1 183 20 1 28 729 LRSAM1,RPL12,SNORA65,ZNF79,SLC2A8
Genomic distribution of SEs associated with SLC2A8
Genome Browser

The strength of the tissue affected by the gene

Expression of SLC2A8

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)