SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000169291
Gene: SHE Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:154469772-154502412 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700017 chr1:154323425-154475541 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 17 90 3916 444 42 340 4720 AQP10,IL6R,ATP8B2,SHE,TDRD10
SE_02_039600799 chr1:154379433-154476467 Sample_02_0396 Skin NHEK-D 799 24 2510 264 31 130 1711 IL6R,TDRD10,SHE
SE_02_023400099 chr1:154384807-154479207 Sample_02_0234 Tonsil Th17 99 17 2425 241 31 131 1711 IL6R,TDRD10,SHE
SE_02_104200032 chr1:154384850-154466802 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 32 38 2106 222 31 116 1334 IL6R,TDRD10,SHE
SE_02_122400167 chr1:154385039-154454867 Sample_02_1224 Bone marrow normal plasma cell 167 28 1776 176 25 98 1043 IL6R,TDRD10,SHE
SE_02_082600174 chr1:154385700-154469869 Sample_02_0826 Stomach gastric tumor 174 42 2157 221 31 130 1711 IL6R,TDRD10,SHE
SE_00_001100295 chr1:154391233-154464188 Sample_00_0011 Esophagus esophagus 295 11 1878 192 29 108 1043 IL6R,TDRD10,SHE,AQP10
SE_02_138800071 chr1:154396093-154465102 Sample_02_1388 Peripheral blood JB6_ALK+ 71 20 1765 172 27 109 1064 IL6R,TDRD10,SHE
SE_02_121900021 chr1:154397981-154454348 Sample_02_1219 Bone marrow H929 21 13 1434 125 21 96 979 IL6R,TDRD10,SHE
SE_02_092800233 chr1:154399842-154479395 Sample_02_0928 Peripheral blood neutrophils_Ecoli 233 15 2057 190 27 131 1715 IL6R,TDRD10,SHE
SE_02_122700016 chr1:154401199-154464047 Sample_02_1227 Bone marrow U266 16 20 1619 158 25 108 1043 IL6R,TDRD10,SHE
SE_00_000700293 chr1:154401375-154468857 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 293 11 1745 169 27 123 1597 IL6R,TDRD10,SHE
SE_02_081600215 chr1:154401695-154467074 Sample_02_0816 Ovary Clear cell ovarian cancer 215 27 1698 167 27 118 1372 IL6R,TDRD10,SHE
SE_00_000600010 chr1:154403025-154467611 Sample_00_0006 Blood CD14-positive-monocyte 10 9 1671 167 27 119 1435 IL6R,TDRD10,SHE
SE_01_008500329 chr1:154403026-154464348 Sample_01_0085 Stomach stomach 329 10 1581 159 25 108 1043 IL6R,TDRD10,SHE
SE_01_002400041 chr1:154403141-154467875 Sample_01_0024 Blood CD14-positive-monocyte 41 10 1677 167 27 119 1474 IL6R,TDRD10,SHE
SE_02_034700109 chr1:154403312-154454379 Sample_02_0347 Blood AML11 109 6 1308 118 20 94 991 IL6R,TDRD10,SHE
SE_02_036700129 chr1:154404042-154454042 Sample_02_0367 Skeletal muscle NS129 129 11 1277 117 19 94 975 IL6R,TDRD10,SHE
SE_02_010100104 chr1:154404132-154474717 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 104 10 1802 179 26 128 1711 IL6R,TDRD10,SHE
SE_01_007500249 chr1:154404274-154466535 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 249 12 1611 165 26 114 1289 IL6R,TDRD10,SHE
SE_02_010200249 chr1:154404301-154467839 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 249 10 1637 166 26 117 1472 IL6R,TDRD10,SHE
SE_02_017201385 chr1:154404308-154464292 Sample_02_0172 Lung IMR-90_quiescent 1385 10 1539 158 24 106 1043 IL6R,TDRD10,SHE
SE_00_002200153 chr1:154404351-154464162 Sample_00_0022 Lung lung_30y 153 13 1531 155 24 106 1043 IL6R,TDRD10,SHE
SE_02_142700788 chr1:154404369-154464101 Sample_02_1427 Shoulder fibroblast_343 788 14 1530 155 24 106 1043 IL6R,TDRD10,SHE
SE_01_008200221 chr1:154404383-154464182 Sample_01_0082 Right lobe of liver right-lobe-of-liver 221 12 1532 156 24 106 1043 IL6R,TDRD10,SHE
SE_02_008100218 chr1:154404418-154475295 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 218 14 1812 179 26 128 1711 IL6R,TDRD10,SHE
SE_01_010400168 chr1:154404437-154464323 Sample_01_0104 Lung upper lobe of left lung 168 22 1532 158 24 106 1043 IL6R,TDRD10,SHE
SE_02_116700261 chr1:154404499-154454270 Sample_02_1167 Biliary H69_TGF Vehicle_1 261 17 1270 117 19 94 975 IL6R,TDRD10,SHE
SE_02_105000272 chr1:154404502-154464261 Sample_02_1050 Highly metastatic osteosarcoma MG63-3_DMSO 272 18 1530 156 24 106 1043 IL6R,TDRD10,SHE
SE_02_116800265 chr1:154404511-154454608 Sample_02_1168 Biliary H69_TGF Vehicle_2 265 19 1280 119 20 95 1024 IL6R,TDRD10,SHE
SE_01_010700333 chr1:154404674-154467353 Sample_01_0107 Esophagus esophagus squamous epithelium 333 24 1615 165 26 116 1407 IL6R,TDRD10,SHE
SE_02_064000109 chr1:154404842-154464103 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 109 21 1520 155 24 106 1043 IL6R,TDRD10,SHE
SE_02_064300145 chr1:154404852-154464045 Sample_02_0643 Mammary gland MDA-MB-436 145 18 1518 155 24 106 1043 IL6R,TDRD10,SHE
SE_02_048000290 chr1:154404876-154454204 Sample_02_0480 Gingival epithelial HGEP 290 15 1261 117 19 94 975 IL6R,TDRD10,SHE,ATP8B2,TPM3,C1orf43,HAX1
SE_02_061100399 chr1:154404930-154453730 Sample_02_0611 Liposarcoma DDLPS_T1 399 21 1250 116 18 92 975 IL6R,TDRD10,SHE
SE_02_116600849 chr1:154404944-154475525 Sample_02_1166 Biliary H69_TGF beta_16h_1 849 18 1806 179 26 128 1711 IL6R,TDRD10,SHE
SE_02_044300246 chr1:154404954-154465387 Sample_02_0443 Bone MG63 246 29 1552 159 24 113 1114 IL6R,TDRD10,SHE
SE_02_044000077 chr1:154404982-154476229 Sample_02_0440 Bone LM7 77 18 1819 179 26 128 1711 IL6R,TDRD10,SHE
SE_02_064200169 chr1:154405339-154464081 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 169 15 1504 154 24 96 969 IL6R,TDRD10,SHE
SE_02_093000391 chr1:154405399-154466848 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 391 36 1586 164 26 95 1257 IL6R,TDRD10,SHE,ATP8B2
SE_02_149600091 chr1:154405408-154467991 Sample_02_1496 Other monocyte-derived dendritic cells_R848_24h 91 26 1611 165 26 98 1402 IL6R,TDRD10,SHE
SE_02_007400262 chr1:154405550-154464286 Sample_02_0074 Other 90-8TL_PDJQ 262 9 1504 156 24 87 915 IL6R,TDRD10,SHE
SE_02_044200195 chr1:154405559-154464116 Sample_02_0442 Bone MG63.3 195 34 1499 153 24 87 910 IL6R,TDRD10,SHE
SE_02_151300104 chr1:154405679-154477317 Sample_02_1513 Lung Transitional AT2->1 cells 104 15 1835 178 26 106 1545 IL6R,TDRD10,SHE
SE_02_047500327 chr1:154405705-154454467 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 327 14 1243 115 19 71 823 IL6R,TDRD10,SHE
SE_02_053400370 chr1:154406334-154467167 Sample_02_0534 Blood vessel Circle of Willis_60y 370 13 1575 163 25 89 1169 IL6R,TDRD10,SHE
SE_02_096700225 chr1:154406726-154466793 Sample_02_0967 Brain H3.3K27M_JN57 225 18 1558 163 25 86 1115 IL6R,TDRD10,SHE
SE_02_104000065 chr1:154406877-154478337 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 65 52 1846 179 25 101 1492 IL6R,TDRD10,SHE
SE_02_104600924 chr1:154406884-154469081 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 924 19 1611 164 25 93 1434 IL6R,TDRD10,SHE
SE_02_046601156 chr1:154407039-154464106 Sample_02_0466 Adipose visceral adipocytes 1156 23 1475 152 22 78 824 IL6R,TDRD10,SHE
SE_02_043800311 chr1:154407082-154469096 Sample_02_0438 Bone HOS 311 17 1612 163 24 94 1437 IL6R,TDRD10,SHE
SE_02_104400044 chr1:154407208-154461400 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 44 14 1413 141 20 68 824 IL6R,TDRD10,SHE
SE_02_151700181 chr1:154407286-154464208 Sample_02_1517 Mammary gland non-transformed human mammary epithelial cell 181 22 1473 152 22 78 824 IL6R,TDRD10,SHE
SE_02_126900648 chr1:154417923-154464194 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 648 7 1187 140 22 64 824 IL6R,TDRD10,SHE
SE_02_124100269 chr1:154419100-154464445 Sample_02_1241 Skin MCC26_virus_negative 269 13 1158 142 22 60 824 IL6R,TDRD10,SHE
SE_02_088301348 chr1:154419356-154463977 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 1348 7 1140 137 22 60 824 IL6R,TDRD10,SHE
SE_02_104301690 chr1:154461199-154478429 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1690 19 433 37 4 33 668 IL6R,TDRD10,SHE
SE_02_022000399 chr1:154546544-154560346 Sample_02_0220 Brain BE2C_1 399 2 311 24 2 187 1383 UBE2Q1,TDRD10,CHRNB2,ADAR,SHE
Genomic distribution of SEs associated with SHE
Genome Browser

The strength of the tissue affected by the gene

Expression of SHE

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)