Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000215837 |
| Gene: | SDHAP2 | Gene type: | transcribed_unprocessed_pseudogene |
| Strand: | + | External links: |
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| Genomic region: | chr3:195658096-195685904 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_01_007600634 | chr3:195523510-195611974 |
Sample_01_0076 | Gastrocnemius medialis | gastrocnemius-medialis | 634 | 9 | 2542 | 323 | 1 | 73 | 884 | APOD,PPP1R2,SDHAP2 |
| SE_02_012600116 | chr3:195579091-195638200 |
Sample_02_0126 | Blood | Induced-regulatory-T-cells_DMSO | 116 | 12 | 1646 | 273 | 0 | 0 | 144 | APOD,PPP1R2,SDHAP2 |
| SE_02_013200090 | chr3:195579091-195638200 |
Sample_02_0132 | Lung | 1015_CL | 90 | 12 | 1646 | 273 | 0 | 0 | 144 | APOD,PPP1R2,SDHAP2 |
| SE_00_003101124 | chr3:195587600-195619215 |
Sample_00_0031 | Placenta | placenta | 1124 | 4 | 1012 | 197 | 0 | 0 | 0 | PPP1R2,APOD,SDHAP2,UC20 |
| SE_02_104701678 | chr3:195599712-195635944 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 1678 | 14 | 954 | 143 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_104801373 | chr3:195606731-195635828 |
Sample_02_1048 | Peripheral blood | CD4+ cell_UNTREATED | 1373 | 10 | 720 | 104 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_012700375 | chr3:195608629-195638185 |
Sample_02_0127 | Blood | Induced-regulatory-T-cells_CPI-703 | 375 | 10 | 712 | 103 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_013100330 | chr3:195608629-195638185 |
Sample_02_0131 | Lung | 1015_PT | 330 | 10 | 712 | 103 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_081800706 | chr3:195611350-195636848 |
Sample_02_0818 | Ovary | High-grade serous ovarian cancer | 706 | 7 | 616 | 96 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_104901699 | chr3:195612329-195639515 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 1699 | 14 | 611 | 92 | 0 | 0 | 0 | LINC00969,SDHAP2,APOD |
| SE_02_021600491 | chr3:195614976-195632276 |
Sample_02_0216 | Skin | NHEK_scramble | 491 | 12 | 398 | 56 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_036300138 | chr3:195615766-195649143 |
Sample_02_0363 | Haematopoietic and lymphoid tissue | 697 | 138 | 4 | 687 | 79 | 0 | 0 | 357 | APOD,SDHAP2 |
| SE_02_021500080 | chr3:195616486-195635181 |
Sample_02_0215 | Skin | NHEK_siGRHL3 | 80 | 11 | 396 | 46 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_041700129 | chr3:195617527-195630871 |
Sample_02_0417 | Embryo | H9_Null | 129 | 2 | 306 | 32 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_082601730 | chr3:195618494-195639462 |
Sample_02_0826 | Stomach | gastric tumor | 1730 | 14 | 405 | 41 | 0 | 0 | 0 | LINC00969,SDHAP2,APOD |
| SE_02_115600350 | chr3:195620065-195635920 |
Sample_02_1156 | Peripheral blood | Day6 Plasmablast CD23- memory B cell | 350 | 10 | 291 | 32 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_045700577 | chr3:195621820-195636933 |
Sample_02_0457 | Th17 lymphocytes | Th17-IL-10- Day 5 | 577 | 6 | 251 | 29 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_115700441 | chr3:195622010-195635861 |
Sample_02_1157 | Peripheral blood | Day6 Plasmablast CD23- memory B cell_G9A-Inhibited | 441 | 14 | 230 | 26 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_045500760 | chr3:195622098-195637313 |
Sample_02_0455 | Th17 lymphocytes | Th17-IL-10+ Day 5 | 760 | 6 | 248 | 29 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_107000270 | chr3:195622226-195635914 |
Sample_02_1070 | Blood | SupT1_WT | 270 | 7 | 219 | 25 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_01_005300493 | chr3:195622476-195635037 |
Sample_01_0053 | Haematopoietic and lymphoid tissue | OCI-LY1 | 493 | 4 | 217 | 25 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_081000556 | chr3:195622509-195637320 |
Sample_02_0810 | Mammary gland | T47D noSerum | 556 | 9 | 237 | 29 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_036200402 | chr3:195623117-195649002 |
Sample_02_0362 | Haematopoietic and lymphoid tissue | REH | 402 | 3 | 472 | 51 | 0 | 0 | 325 | APOD,SDHAP2 |
| SE_02_139200581 | chr3:195624388-195636968 |
Sample_02_1392 | Peripheral blood | Mac-2A_ALK- | 581 | 3 | 213 | 24 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_103501333 | chr3:195624648-195636831 |
Sample_02_1035 | Mammary gland | HCC70_Vehicle | 1333 | 3 | 212 | 23 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_103601390 | chr3:195624651-195635944 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 1390 | 2 | 196 | 21 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_038300018 | chr3:195625100-195632667 |
Sample_02_0383 | Blood | Ik6pre-BALL+TET-emptyvector | 18 | 2 | 161 | 18 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_038400033 | chr3:195625144-195631668 |
Sample_02_0384 | Blood | Ik6pre-BALL+TET-Ik1 | 33 | 2 | 138 | 16 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_004500581 | chr3:195629670-195631951 |
Sample_02_0045 | Embryo endodermal | CyT49_ES_D7 | 581 | 1 | 56 | 8 | 0 | 0 | 0 | APOD,SDHAP2 |
| SE_02_003800064 | chr3:195691979-195718986 |
Sample_02_0038 | Embryo | DE | 64 | 6 | 776 | 116 | 0 | 25 | 561 | MIR570,MUC20,SDHAP2 |
| SE_02_040800409 | chr3:195696799-195723610 |
Sample_02_0408 | Kidney | G401_Dox | 409 | 4 | 740 | 137 | 0 | 30 | 657 | MUC20,MIR570,SDHAP2 |
| SE_02_004300893 | chr3:195698087-195712480 |
Sample_02_0043 | Embryo endodermal | CyT49_ES_D2 | 893 | 4 | 432 | 78 | 0 | 25 | 561 | MIR570,MUC20,SDHAP2 |
| SE_02_024100384 | chr3:195704095-195724663 |
Sample_02_0241 | Colon | V456 | 384 | 3 | 490 | 92 | 0 | 25 | 503 | MUC20,SDHAP2,MIR570 |
| SE_02_035400233 | chr3:195704154-195723577 |
Sample_02_0354 | Colon | Colo205 | 233 | 2 | 480 | 92 | 0 | 25 | 366 | MUC20,SDHAP2,MIR570 |
| SE_02_023700389 | chr3:195704628-195730265 |
Sample_02_0237 | Colon | V389 | 389 | 6 | 718 | 131 | 1 | 38 | 1002 | MUC20,SDHAP2,MIR570 |
Genomic distribution of SEs associated with SDHAP2