Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000207203
Gene: RNU6-71P Gene type: snRNA
Strand: + External links:
Genomic region: chr13:36267168-36267274 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_156700126 chr13:36284397-36339023 Sample_02_1567 iPSCs CiPSC 126 9 1303 197 1 56 789 CCDC169,SPG20,CCDC169-SOHLH2,RNU6-71P,SPG20-AS1
SE_02_157200690 chr13:36284564-36302016 Sample_02_1572 iPSCs FiPSC 690 2 388 68 1 6 171 CCDC169,SPG20,CCDC169-SOHLH2,SPG20-AS1,RNU6-71P
SE_02_157001315 chr13:36284728-36301334 Sample_02_1570 iPSCs EiPSC 1315 2 369 64 0 6 144 CCDC169,CCDC169-SOHLH2,SPG20,SPG20-AS1,RNU6-71P
SE_02_149201227 chr13:36313696-36348187 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1227 10 859 122 0 32 566 SPG20,SPG20-AS1,RNU6-71P,CCDC169-SOHLH2
SE_02_157001152 chr13:36314270-36338971 Sample_02_1570 iPSCs EiPSC 1152 7 638 97 0 26 353 SPG20,RNU6-71P,SPG20-AS1,CCDC169-SOHLH2
SE_02_056000482 chr13:36314772-36326106 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 482 9 327 66 0 0 35 SPG20,RNU6-71P,SPG20-AS1,CCDC169-SOHLH2
SE_02_055900949 chr13:36314831-36326312 Sample_02_0559 iPSCs FX52 iPSCs dC-T 949 7 329 66 0 0 75 SPG20,RNU6-71P,SPG20-AS1,CCDC169-SOHLH2
SE_02_157200474 chr13:36314921-36344530 Sample_02_1572 iPSCs FiPSC 474 6 743 110 0 22 325 SPG20,RNU6-71P,SPG20-AS1,CCDC169-SOHLH2
SE_02_047400925 chr13:36315111-36363443 Sample_02_0474 Fibroblast umbilical cord Fibroblast 925 12 1158 165 2 30 563 SPG20,SPG20-AS1,RNU6-71P,CCDC169-SOHLH2
SE_02_075200989 chr13:36316603-36357060 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 989 6 969 146 0 25 522 SPG20,SPG20-AS1,RNU6-71P,CCDC169-SOHLH2

Genomic distribution of SEs associated with RNU6-71P

The strength of the tissue affected by the gene


Expression of RNU6-71P