Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000117906 |
| Gene: | RCN2 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr15:76931738-76954393 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_103602379 | chr15:76896111-76905528 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 2379 | 6 | 239 | 24 | 1 | 23 | 224 | RCN2,SCAPER |
| SE_02_077502414 | chr15:76899344-76907495 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 2414 | 4 | 218 | 20 | 1 | 27 | 232 | RCN2,SCAPER |
| SE_02_104700031 | chr15:76957966-77043513 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 31 | 32 | 2566 | 165 | 2 | 171 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_104600315 | chr15:76960828-77043286 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 315 | 39 | 2468 | 158 | 2 | 171 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_156500091 | chr15:76960916-76998907 |
Sample_02_1565 | Gastrointestinal Stromal | Gastrointestinal stromal tumor | 91 | 16 | 993 | 61 | 1 | 85 | 313 | PSTPIP1,RCN2 |
| SE_02_104300096 | chr15:76965152-77053422 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 96 | 55 | 2583 | 170 | 1 | 180 | 2506 | PSTPIP1,TSPAN3,RCN2 |
| SE_02_039601392 | chr15:76967058-77038957 |
Sample_02_0396 | Skin | NHEK-D | 1392 | 13 | 2177 | 149 | 1 | 131 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_119701054 | chr15:76967092-77045725 |
Sample_02_1197 | Brain | GBM33 | 1054 | 19 | 2368 | 157 | 1 | 144 | 2308 | PSTPIP1,TSPAN3,RCN2 |
| SE_02_133000121 | chr15:76968381-77037873 |
Sample_02_1330 | Blood | AMU-AML1 | 121 | 27 | 2104 | 146 | 1 | 131 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_104900054 | chr15:76973178-77038192 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 54 | 31 | 2013 | 141 | 1 | 123 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_012600155 | chr15:76973257-77024754 |
Sample_02_0126 | Blood | Induced-regulatory-T-cells_DMSO | 155 | 7 | 1466 | 120 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_013200126 | chr15:76973257-77024754 |
Sample_02_0132 | Lung | 1015_CL | 126 | 7 | 1466 | 120 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_012700197 | chr15:76973306-77024489 |
Sample_02_0127 | Blood | Induced-regulatory-T-cells_CPI-703 | 197 | 10 | 1457 | 120 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_013100162 | chr15:76973306-77024489 |
Sample_02_0131 | Lung | 1015_PT | 162 | 10 | 1457 | 120 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_010100240 | chr15:76973398-77027825 |
Sample_02_0101 | Peripheral blood | Macrophages_GM-CSF_72h_IFN-y | 240 | 9 | 1559 | 122 | 1 | 92 | 884 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_083500759 | chr15:76973523-77032200 |
Sample_02_0835 | Bone marrow | TEX-HIST1H3H-K27M-Rx_cells | 759 | 15 | 1728 | 127 | 1 | 101 | 1431 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_084100267 | chr15:76973579-77022988 |
Sample_02_0841 | Blood | THP-1_untr | 267 | 18 | 1401 | 117 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_083700268 | chr15:76973612-77038592 |
Sample_02_0837 | Bone marrow | TEX-Luciferase-Rx_cells | 268 | 24 | 2015 | 140 | 1 | 123 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_145800332 | chr15:76973619-77024426 |
Sample_02_1458 | Pancreas | THP1+PANC1_shNC | 332 | 14 | 1449 | 119 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_083400462 | chr15:76973638-77038169 |
Sample_02_0834 | Bone marrow | TEX-HIST1H3F-WT-Rx_cells | 462 | 20 | 2001 | 140 | 1 | 123 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_083300442 | chr15:76973642-77031990 |
Sample_02_0833 | Bone marrow | TEX-HIST1H3F-K27I-2-Rx_cells | 442 | 17 | 1719 | 125 | 1 | 101 | 1416 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_133200409 | chr15:76973651-77037668 |
Sample_02_1332 | Blood | Monomac6_CTRL | 409 | 17 | 1963 | 138 | 1 | 123 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_092800386 | chr15:76973669-77022511 |
Sample_02_0928 | Peripheral blood | neutrophils_Ecoli | 386 | 16 | 1387 | 115 | 0 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_152900322 | chr15:76973752-77043236 |
Sample_02_1529 | Peripheral blood | neutrophils_0BC75 | 322 | 34 | 2151 | 145 | 1 | 135 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_122700394 | chr15:76973775-77035258 |
Sample_02_1227 | Bone marrow | U266 | 394 | 18 | 1835 | 134 | 1 | 112 | 1659 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_153000247 | chr15:76974622-77041150 |
Sample_02_1530 | Peripheral blood | neutrophils_0BA0X | 247 | 18 | 2059 | 141 | 1 | 135 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_134500242 | chr15:76975371-77022670 |
Sample_02_1345 | Leukophereses | leukophereses_p358 | 242 | 27 | 1346 | 113 | 1 | 86 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_01_005200265 | chr15:76975714-77021577 |
Sample_01_0052 | Blood | neutrophil | 265 | 8 | 1296 | 107 | 0 | 85 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_153100343 | chr15:76975916-77027065 |
Sample_02_1531 | Peripheral blood | neutrophils_0B9ZK | 343 | 18 | 1468 | 115 | 1 | 90 | 830 | PSTPIP1,RCN2,TSPAN3 |
| SE_01_002400237 | chr15:76975957-77043414 |
Sample_01_0024 | Blood | CD14-positive-monocyte | 237 | 13 | 2090 | 141 | 1 | 133 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_010400144 | chr15:76976035-77023178 |
Sample_02_0104 | Blood | neutrophils | 144 | 11 | 1338 | 111 | 1 | 84 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_050100380 | chr15:76976311-77023353 |
Sample_02_0501 | Blood | HL-60_CTRL | 380 | 12 | 1336 | 111 | 1 | 84 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_045500139 | chr15:76976353-77023558 |
Sample_02_0455 | Th17 lymphocytes | Th17-IL-10+ Day 5 | 139 | 11 | 1345 | 111 | 1 | 84 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_138800295 | chr15:76976375-77023785 |
Sample_02_1388 | Peripheral blood | JB6_ALK+ | 295 | 19 | 1352 | 111 | 1 | 84 | 652 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_083600431 | chr15:76976405-77038496 |
Sample_02_0836 | Bone marrow | TEX-HIST1H3H-WT-Rx_cells | 431 | 23 | 1928 | 134 | 1 | 121 | 2015 | PSTPIP1,RCN2,TSPAN3 |
| SE_02_034300461 | chr15:76976835-77023129 |
Sample_02_0343 | Bone marrow | HSPC_A0 | 461 | 8 | 1316 | 110 | 1 | 83 | 652 | PSTPIP1,RCN2,TSPAN3 |
Genomic distribution of SEs associated with RCN2