SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000100461
Gene: RBM23 Gene type: protein_coding
Strand: - External links:
Genomic region: chr14:22893204-22919182 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_053300601 chr14:22836614-22873331 Sample_02_0533 Blood vessel Circle of Willis_54y 601 9 1020 71 4 241 1818 LRP10,MMP14,RBM23,SLC7A7,REM2,MRPL52,PRMT5-AS1
SE_02_104300575 chr14:22838650-22917168 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 575 25 2237 185 14 425 4358 LRP10,MMP14,REM2,RBM23,PRMT5,SLC7A7,MIR4707,LOC101926933,HAUS4,MRPL52,PRMT5-AS1
SE_02_138800710 chr14:22848079-22873679 Sample_02_1388 Peripheral blood JB6_ALK+ 710 4 702 50 0 71 470 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_02_122300783 chr14:22852806-22873436 Sample_02_1223 Bone marrow KMS28BM 783 4 558 29 0 37 438 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_02_077501757 chr14:22863151-22895378 Sample_02_0775 Pancreas EndoC-BH1_SE 1757 8 843 56 6 196 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_092700590 chr14:22866818-22873536 Sample_02_0927 Peripheral blood neutrophils_US 590 3 173 7 0 31 455 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_02_152900860 chr14:22867364-22887502 Sample_02_1529 Peripheral blood neutrophils_0BC75 860 6 550 25 2 175 2066 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_153000862 chr14:22868047-22887224 Sample_02_1530 Peripheral blood neutrophils_0BA0X 862 3 525 23 2 173 2036 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_085200357 chr14:22868322-22889413 Sample_02_0852 Mammary gland MCF7L-P 357 7 575 28 3 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_115900354 chr14:22868469-22889460 Sample_02_1159 Mammary gland MCF7 354 7 572 28 3 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1,HAUS4
SE_04_000200923 chr14:22868571-22900280 Sample_04_0002 Blood cold shocked K562 923 3 847 61 9 230 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1,HAUS4,OXA1L
SE_02_081800758 chr14:22868579-22889284 Sample_02_0818 Ovary High-grade serous ovarian cancer 758 4 566 27 2 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_125801031 chr14:22868889-22888591 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 1031 6 538 25 2 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_01_008501110 chr14:22869257-22889005 Sample_01_0085 Stomach stomach 1110 2 533 26 2 187 2137 REM2,LRP10,MMP14,MRPL52,PRMT5,SLC7A7,RBM23
SE_01_010401037 chr14:22869422-22873282 Sample_01_0104 Lung upper lobe of left lung 1037 1 103 5 0 26 403 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_02_022800315 chr14:22869427-22889042 Sample_02_0228 Oesophagus KYSE510 315 2 531 26 2 187 2137 REM2,LRP10,MMP14,MRPL52,PRMT5,SLC7A7,RBM23
SE_01_008400638 chr14:22869470-22917530 Sample_01_0084 Spleen spleen 638 7 1386 122 10 237 3066 REM2,RBM23,LRP10,MMP14,MRPL52,PRMT5,SLC7A7,HAUS4
SE_02_136700585 chr14:22869477-22888357 Sample_02_1367 Pancreas Capan1-untreated 585 2 513 24 2 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_01_007200801 chr14:22869488-22888567 Sample_01_0072 Breast epithelium breast-epithelium 801 2 517 24 2 187 2137 REM2,LRP10,MMP14,MRPL52,PRMT5,SLC7A7,RBM23
SE_02_081700728 chr14:22869577-22873448 Sample_02_0817 Ovary Epithelial ovarian cancer 728 1 102 5 0 29 439 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_02_050400303 chr14:22869591-22888826 Sample_02_0504 Esophagus KYSE510_1 303 3 518 25 2 187 2137 LRP10,REM2,PRMT5,RBM23,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_01_010701104 chr14:22869595-22873697 Sample_01_0107 Esophagus esophagus squamous epithelium 1104 1 112 5 0 31 470 LRP10,RBM23,SLC7A7,MMP14,REM2,MRPL52,PRMT5-AS1
SE_01_007501024 chr14:22869628-22903783 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 1024 4 946 76 10 237 2608 REM2,RBM23,LRP10,MMP14,MRPL52,PRMT5,SLC7A7
SE_02_074600837 chr14:22869637-22903733 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 837 8 944 76 10 237 2602 LRP10,REM2,RBM23,PRMT5,SLC7A7,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_088601313 chr14:22870100-22900189 Sample_02_0886 Skin foreskin_ p63KLF4 1313 4 796 59 9 230 2137 LRP10,REM2,PRMT5,RBM23,MMP14,LOC101926933,MRPL52,PRMT5-AS1
SE_02_004600669 chr14:22881924-22888436 Sample_02_0046 Embryo endodermal CyT49_ES_D10 669 2 171 10 2 87 721 REM2,MMP14,RBM23,PRMT5,LRP10
SE_02_004500659 chr14:22882055-22888396 Sample_02_0045 Embryo endodermal CyT49_ES_D7 659 2 167 10 2 87 721 REM2,MMP14,RBM23,PRMT5,LRP10
SE_02_122400784 chr14:22884753-22926714 Sample_02_1224 Bone marrow normal plasma cell 784 14 1208 140 11 170 2186 RBM23,REM2,PRMT5-AS1,PRMT5,MMP14,LRP10,MIR4707,LOC101926933,HAUS4
SE_01_002100709 chr14:22885848-22910480 Sample_01_0021 Skin bipolar-neuron 709 5 706 81 9 87 1298 REM2,RBM23,MMP14,LRP10,PRMT5,HAUS4
SE_02_075001102 chr14:22885938-22900223 Sample_02_0750 Lymphoma Rec-1_GSI 1102 5 368 41 8 80 396 REM2,PRMT5,RBM23,MMP14,LRP10,LOC101926933,PRMT5-AS1
SE_02_103602649 chr14:22886394-22887325 Sample_02_1036 Mammary gland HCC70_XY018 2649 1 26 1 0 18 208 REM2,PRMT5,RBM23,MMP14,LRP10,LOC101926933,PRMT5-AS1
SE_02_139400615 chr14:22886567-22909179 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 615 5 647 77 8 82 1088 REM2,RBM23,PRMT5,LRP10,MIR4707,LOC101926933,HAUS4,PRMT5-AS1
SE_02_092700524 chr14:22899937-22926940 Sample_02_0927 Peripheral blood neutrophils_US 524 6 825 98 2 82 1656 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,LOC101926933,HAUS4
SE_02_153100361 chr14:22900449-22927337 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 361 4 826 97 2 79 1661 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,AJUBA,LOC101926933,HAUS4
SE_02_032600689 chr14:22902439-22920506 Sample_02_0326 Liver hepatocytes_d3 689 2 575 71 1 1 742 RBM23,PRMT5,LRP10,REM2,HAUS4
SE_02_032500856 chr14:22902528-22920696 Sample_02_0325 Liver hepatocytes_d1 856 2 574 72 1 1 749 RBM23,PRMT5,LRP10,REM2,HAUS4
SE_02_032701036 chr14:22902532-22919590 Sample_02_0327 Liver hepatocytes_d6 1036 2 550 66 1 0 702 RBM23,PRMT5,LRP10,REM2,HAUS4
SE_02_143100882 chr14:22908440-22920543 Sample_02_1431 Blood T cell 882 2 379 42 1 1 238 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,LOC101926933,HAUS4
SE_02_153000421 chr14:22913694-22921642 Sample_02_1530 Peripheral blood neutrophils_0BA0X 421 1 247 25 1 15 207 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,LOC101926933,HAUS4
SE_02_152900458 chr14:22914133-22921896 Sample_02_1529 Peripheral blood neutrophils_0BC75 458 1 246 26 1 15 207 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,LOC101926933,HAUS4
SE_02_092800500 chr14:22914486-22920959 Sample_02_0928 Peripheral blood neutrophils_Ecoli 500 1 210 23 1 1 179 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,LOC101926933,HAUS4
SE_02_146000629 chr14:22915173-22929453 Sample_02_1460 Blood Mutz-3 629 2 391 45 1 121 1030 RBM23,PRMT5-AS1,PRMT5,LRP10,MIR4707,REM2,AJUBA,LOC101926933,HAUS4
SE_02_035200507 chr14:22916817-22937250 Sample_02_0352 Colon HCT116 507 3 567 84 2 138 1096 RBM23,PRMT5,JUB,LRP10,HAUS4,REM2
SE_00_000700615 chr14:22917019-22921459 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 615 1 138 20 1 15 207 RBM23,PRMT5,LRP10,REM2,HAUS4
SE_00_000800736 chr14:22917120-22921407 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 736 1 133 19 1 15 207 RBM23,PRMT5,LRP10,REM2,HAUS4
SE_02_122801007 chr14:22925516-22940758 Sample_02_1228 Mammary gland MDA-MB-231_2 1007 6 421 59 1 86 498 LOC101926933,PRMT5,AJUBA,RBM23,REM2,MIR4707,HAUS4,PRMT5-AS1
SE_02_077502051 chr14:22929952-22971105 Sample_02_0775 Pancreas EndoC-BH1_SE 2051 11 1032 114 2 72 676 HAUS4,MIR4707,LOC101926933,PRMT5,AJUBA,RBM23,REM2,C14ORF93,PRMT5-AS1,PSMB11
SE_02_103200670 chr14:22931888-22960598 Sample_02_1032 Head and neck SCC1 JQ1 670 5 722 85 2 55 665 HAUS4,MIR4707,LOC101926933,PRMT5,AJUBA,RBM23,REM2,C14ORF93,PRMT5-AS1
SE_02_028600020 chr14:22951404-22984050 Sample_02_0286 Liver HuH7_IL-1alpha_1h 20 3 794 62 0 186 1605 JUB,HAUS4,C14ORF93,PRMT5,RBM23
SE_01_003700392 chr14:22954786-22983772 Sample_01_0037 Liver hepatocyte 392 3 709 55 0 179 1471 JUB,HAUS4,C14ORF93,PRMT5,RBM23
SE_02_038100547 chr14:22955089-22983757 Sample_02_0381 Heart purified cardiomyocyte WT 547 3 703 53 0 179 1447 JUB,HAUS4,C14ORF93,PRMT5,RBM23
SE_02_028500044 chr14:22965185-22983901 Sample_02_0285 Liver HuH7_untreat 44 2 466 40 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4
SE_02_074700256 chr14:22965443-23007895 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 256 8 1059 79 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_01_008200578 chr14:22965976-22983628 Sample_01_0082 Right lobe of liver right-lobe-of-liver 578 2 428 38 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4
SE_02_001500037 chr14:22966039-22983692 Sample_02_0015 Liver HepG2_shNS 37 2 428 39 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4
SE_02_052400117 chr14:22966040-22983524 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 117 6 424 38 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_088400575 chr14:22966125-22983971 Sample_02_0884 Colon LoVo 575 2 436 38 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_111100254 chr14:22966159-23008099 Sample_02_1111 Other HGrC1_SMAD2/3KO 254 10 1048 79 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_052500084 chr14:22966160-22983448 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 84 6 422 37 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_047600950 chr14:22966209-22980697 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 950 3 344 31 0 78 762 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_01_009500283 chr14:22966226-22980692 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 283 6 343 31 0 78 762 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_074500102 chr14:22966231-22983446 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 102 2 419 37 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_01_003800008 chr14:22966232-22983884 Sample_01_0038 Liver HepG2 8 2 429 38 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4,ACIN1,AJUBA,LRP10,PRT5,PSB5
SE_02_047500726 chr14:22966239-22980698 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 726 3 343 31 0 78 762 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_047900039 chr14:22966258-23008139 Sample_02_0479 Head and neck SCC25 39 10 1043 79 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_004000074 chr14:22966268-22986545 Sample_02_0040 Embryo PFG 74 4 493 38 0 149 1249 JUB,C14ORF93,PSMB5,PRMT5,RBM23,HAUS4
SE_02_126900114 chr14:22966285-23007767 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 114 6 1036 78 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_074400033 chr14:22966307-23007710 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 33 9 1035 78 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_035500156 chr14:22966748-22983671 Sample_02_0355 Colon HCT15 156 2 408 37 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4
SE_02_125900226 chr14:22966851-22983452 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 226 4 403 37 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_033000125 chr14:22966860-23007988 Sample_02_0330 Endoderm MHG 125 7 1024 78 1 247 2000 JUB,C14ORF93,PSMB5,PRMT5,HAUS4,CDH24,RBM23,PSMB11
SE_02_074600722 chr14:22966987-22983331 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 722 2 395 37 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_126500972 chr14:22966988-22983474 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 972 3 400 37 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_092100622 chr14:22966994-23008147 Sample_02_0921 Heart embryonic heart_CS22 622 8 1027 79 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1,C14orf93,RP11-298I3.5
SE_02_039600116 chr14:22967222-22983534 Sample_02_0396 Skin NHEK-D 116 2 395 35 0 147 1249 JUB,C14ORF93,PRMT5,RBM23,HAUS4
SE_02_136000476 chr14:22967271-22980750 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 476 3 318 29 0 82 762 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_152700480 chr14:22967300-22980732 Sample_02_1527 Embryo naive embryonic stem cell 480 6 315 29 0 78 762 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_150300583 chr14:22967322-23008498 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 583 4 1022 78 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_143300428 chr14:22967324-23029785 Sample_02_1433 Bone A673 STAG2 null 428 18 1533 113 3 282 2274 C14ORF93,PSMB5,AJUBA,PRMT5,CDH24,RBM23,PSMB11,MIR4707,HAUS4,LOC101926933,ACIN1,PRMT5-AS1
SE_02_104301285 chr14:22967343-23026297 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1285 14 1462 109 3 280 2175 C14ORF93,PSMB5,AJUBA,PRMT5,CDH24,RBM23,PSMB11,MIR4707,HAUS4,LOC101926933,ACIN1,PRMT5-AS1
SE_02_116800083 chr14:22967349-23008151 Sample_02_1168 Biliary H69_TGF Vehicle_2 83 8 1018 77 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_116600113 chr14:22967732-23008103 Sample_02_1166 Biliary H69_TGF beta_16h_1 113 7 1013 77 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
SE_02_116900145 chr14:22967805-22983407 Sample_02_1169 Biliary H69_TGF beta_16h_2 145 3 383 35 0 147 1249 AJUBA,PRMT5,RBM23,MIR4707,HAUS4,LOC101926933,C14ORF93,PRMT5-AS1
SE_02_102900336 chr14:22968989-23008218 Sample_02_1029 Colon HCT116 336 6 982 75 1 247 2000 C14ORF93,AJUBA,PRMT5,RBM23,PSMB5,PSMB11,MIR4707,HAUS4,LOC101926933,CDH24,PRMT5-AS1
Genomic distribution of SEs associated with RBM23
Genome Browser

The strength of the tissue affected by the gene

Expression of RBM23

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)