Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000214842 |
| Gene: | RAD51AP2 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr2:17510584-17518439 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_071201063 | chr2:17494942-17509382 |
Sample_02_0712 | Pancreas | BxPC3_sgNEG | 1063 | 6 | 372 | 37 | 2 | 16 | 0 | VSNL1,RAD51AP2 |
| SE_02_070701020 | chr2:17495110-17508820 |
Sample_02_0707 | Pancreas | BxPC3 WT | 1020 | 5 | 351 | 35 | 2 | 16 | 0 | VSNL1,RAD51AP2 |
| SE_02_070400480 | chr2:17505119-17507938 |
Sample_02_0704 | Pancreas | HPAFII WT | 480 | 2 | 63 | 5 | 0 | 0 | 0 | VSNL1,RAD51AP2 |
| SE_02_024200643 | chr2:17536040-17559717 |
Sample_02_0242 | Colon | V481 | 643 | 2 | 581 | 71 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_02_047801058 | chr2:17536672-17558187 |
Sample_02_0478 | Colon | normal colon mucosa | 1058 | 9 | 530 | 64 | 1 | 106 | 125 | VSNL1,RAD51AP2 |
| SE_02_088401015 | chr2:17536953-17559368 |
Sample_02_0884 | Colon | LoVo | 1015 | 5 | 550 | 67 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_02_032400079 | chr2:17537463-17591026 |
Sample_02_0324 | Colon | SW48 | 79 | 3 | 1349 | 189 | 3 | 209 | 125 | VSNL1,RAD51AP2 |
| SE_02_050500820 | chr2:17537644-17558214 |
Sample_02_0505 | Esophagus | KYSE70_1 | 820 | 4 | 500 | 59 | 1 | 106 | 125 | VSNL1,RAD51AP2 |
| SE_02_105100114 | chr2:17537648-17560147 |
Sample_02_1051 | Esophagus | Eso26 | 114 | 8 | 544 | 66 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_02_068500734 | chr2:17537671-17544087 |
Sample_02_0685 | Lung | NCI-H1048_no infection | 734 | 3 | 172 | 15 | 0 | 63 | 125 | VSNL1,RAD51AP2 |
| SE_02_023700765 | chr2:17537692-17559391 |
Sample_02_0237 | Colon | V389 | 765 | 5 | 523 | 63 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_02_069800183 | chr2:17537739-17560047 |
Sample_02_0698 | Lung | NCI-H1048-cas9_sgPOU2F3 | 183 | 4 | 540 | 65 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_02_023600309 | chr2:17537741-17559171 |
Sample_02_0236 | Colon | V206 | 309 | 6 | 517 | 62 | 1 | 109 | 125 | VSNL1,RAD51AP2 |
| SE_01_003800366 | chr2:17537786-17558324 |
Sample_01_0038 | Liver | HepG2 | 366 | 2 | 496 | 59 | 1 | 107 | 125 | VSNL1,RAD51AP2 |
| SE_02_001500696 | chr2:17537870-17547073 |
Sample_02_0015 | Liver | HepG2_shNS | 696 | 4 | 222 | 18 | 0 | 74 | 125 | VSNL1,RAD51AP2 |
| SE_02_047701168 | chr2:17537925-17559169 |
Sample_02_0477 | Colon | intestinal epithelial organoids_139a | 1168 | 6 | 512 | 62 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_117400034 | chr2:17538041-17653496 |
Sample_02_1174 | Brain | GBM02 | 34 | 46 | 2916 | 388 | 9 | 351 | 292 | VSNL1,RAD51AP2 |
| SE_02_006400184 | chr2:17538057-17558438 |
Sample_02_0064 | Embryo | DN-Early_G1 | 184 | 5 | 491 | 59 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_066100815 | chr2:17538073-17558220 |
Sample_02_0661 | Mammary gland | MCF10DCIS-TetTCF7 | 815 | 5 | 486 | 59 | 1 | 105 | 125 | VSNL1,RAD51AP2 |
| SE_02_069700239 | chr2:17538093-17560069 |
Sample_02_0697 | Lung | NCI-H1048-cas9_sgHROSA | 239 | 10 | 529 | 66 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_145700116 | chr2:17538203-17558302 |
Sample_02_1457 | Embryo | HUES8 WT | 116 | 4 | 484 | 59 | 1 | 106 | 125 | VSNL1,RAD51AP2 |
| SE_02_068100509 | chr2:17538293-17544497 |
Sample_02_0681 | Embryo | H1 hESC-derived neural progenitor cells_Smad_72hr | 509 | 3 | 161 | 15 | 0 | 63 | 125 | VSNL1,RAD51AP2 |
| SE_02_156700138 | chr2:17538355-17559408 |
Sample_02_1567 | iPSCs | CiPSC | 138 | 8 | 504 | 63 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_117200262 | chr2:17538374-17560088 |
Sample_02_1172 | Embryo | H9 WT | 262 | 6 | 523 | 66 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_001400399 | chr2:17538423-17546358 |
Sample_02_0014 | Liver | HepG2_shBRG1 | 399 | 2 | 190 | 18 | 0 | 74 | 125 | VSNL1,RAD51AP2 |
| SE_02_157200072 | chr2:17538435-17559303 |
Sample_02_1572 | iPSCs | FiPSC | 72 | 5 | 497 | 63 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_003600509 | chr2:17538455-17559383 |
Sample_02_0036 | Embryo | H7 | 509 | 5 | 500 | 63 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_02_157000077 | chr2:17538455-17559882 |
Sample_02_1570 | iPSCs | EiPSC | 77 | 8 | 514 | 65 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_00_001200152 | chr2:17538528-17559247 |
Sample_00_0012 | Embryo | H1-hESC | 152 | 6 | 496 | 63 | 1 | 108 | 125 | VSNL1,RAD51AP2 |
| SE_00_001300150 | chr2:17539561-17558176 |
Sample_00_0013 | Embryo | H9 | 150 | 4 | 444 | 57 | 1 | 104 | 125 | VSNL1,RAD51AP2 |
| SE_02_006700302 | chr2:17539693-17558410 |
Sample_02_0067 | Embryo | AzH-G2/M | 302 | 3 | 444 | 55 | 1 | 107 | 125 | VSNL1,RAD51AP2 |
| SE_02_006500328 | chr2:17542254-17561023 |
Sample_02_0065 | Embryo | KO2-Late_G1 | 328 | 2 | 445 | 59 | 1 | 62 | 0 | VSNL1,RAD51AP2 |
| SE_01_003100145 | chr2:17542267-17557865 |
Sample_01_0031 | Skin | GM23338 | 145 | 2 | 367 | 46 | 1 | 59 | 0 | VSNL1,RAD51AP2 |
| SE_01_005100234 | chr2:17542756-17560064 |
Sample_01_0051 | Embryo | neural-progenitor-cell | 234 | 2 | 400 | 53 | 1 | 55 | 0 | VSNL1,RAD51AP2 |
| SE_02_022800446 | chr2:17563883-17594613 |
Sample_02_0228 | Oesophagus | KYSE510 | 446 | 5 | 816 | 129 | 5 | 102 | 53 | VSNL1,RAD51AP2 |
| SE_02_050400448 | chr2:17564065-17594225 |
Sample_02_0504 | Esophagus | KYSE510_1 | 448 | 13 | 797 | 125 | 5 | 102 | 53 | VSNL1,RAD51AP2 |
| SE_02_061800021 | chr2:17564737-17629010 |
Sample_02_0618 | Head and Neck | HPV+ HNSCC_SCC-090 | 21 | 26 | 1664 | 252 | 8 | 191 | 53 | VSNL1,RAD51AP2 |
Genomic distribution of SEs associated with RAD51AP2