SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000245849
Gene: RAD51-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr15:40686183-40695107 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103602320 chr15:40654629-40683840 Sample_02_1036 Mammary gland HCC70_XY018 2320 6 797 88 0 18 311 CASC5,RAD51,RAD51-AS1
SE_02_122100808 chr15:40731128-40746097 Sample_02_1221 Bone marrow KMS11 808 5 472 36 1 41 771 RAD51,RMDN3,RAD51-AS1,GCHFR,C15ORF62
SE_02_116000670 chr15:40738091-40768438 Sample_02_1160 Embryo H1_shLuc 670 6 850 80 1 84 1361 DNAJC17,RMDN3,GCHFR,RAD51-AS1,ZFYVE19,C15ORF62,RAD51,PPP1R14D
SE_02_109500349 chr15:40742415-40767746 Sample_02_1095 Blood CD34 Erythroid cells_Don002 349 5 686 69 1 65 1100 RMDN3,GCHFR,RAD51-AS1,ZFYVE19,DNAJC17,C15ORF62,RAD51
SE_02_109600270 chr15:40742468-40768570 Sample_02_1096 Blood CD34 Erythroid cells_Don003 270 4 709 70 1 76 1204 DNAJC17,RMDN3,GCHFR,RAD51-AS1,ZFYVE19,C15ORF62,RAD51
SE_02_136300276 chr15:40742597-40767783 Sample_02_1363 Blood Hudep2 276 6 686 69 1 65 1107 RMDN3,GCHFR,RAD51-AS1,ZFYVE19,DNAJC17,C15ORF62,RAD51
Genomic distribution of SEs associated with RAD51-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of RAD51-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)