Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000225706 |
| Gene: | PTPRD-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr9:8858127-8864772 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_107800188 | chr9:8773189-8852737 |
Sample_02_1078 | Muscle | RMS235_PAX3-NCOA1 | 188 | 45 | 3181 | 109 | 21 | 356 | 0 | PTPRD,PTPRD-AS1 |
| SE_02_059401450 | chr9:8781210-8836133 |
Sample_02_0594 | iPSC-derived | neural progenitors | 1450 | 11 | 2167 | 46 | 14 | 227 | 0 | PTPRD,PTPRD-AS1 |
| SE_02_141300202 | chr9:8783473-8826021 |
Sample_02_1413 | Muscle | RH4_sgBRG1 | 202 | 13 | 1659 | 24 | 5 | 192 | 0 | PTPRD,PTPRD-AS1 |
| SE_02_101701370 | chr9:8799049-8835591 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1370 | 11 | 1433 | 44 | 12 | 130 | 0 | PTPRD,PTPRD-AS1 |
Genomic distribution of SEs associated with PTPRD-AS1