Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000169410
Gene: PTPN9 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:75463251-75579315 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_045400750 chr15:75596776-75623052 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 750 10 641 54 0 88 588 SNUPN,SNX33,PTPN9,IMP3
SE_02_103602146 chr15:75619777-75638346 Sample_02_1036 Mammary gland HCC70_XY018 2146 9 437 46 1 17 540 SNUPN,SNX33,PTPN9,IMP3
SE_02_004900219 chr15:75624867-75649511 Sample_02_0049 Embryo endodermal CyT49_GTtoH 219 3 583 55 1 76 1037 IMP3,SNX33,SNUPN,PTPN9
SE_01_003600152 chr15:75626997-75673867 Sample_01_0036 Cervix HeLa-S3 152 8 1196 99 4 230 1295 IMP3,SNX33,CSPG4,PTPN9,SNUPN,AC105020.1,IP3,ODF3L1
SE_02_003801256 chr15:75627108-75649272 Sample_02_0038 Embryo DE 1256 4 531 50 1 70 600 IMP3,SNX33,PTPN9,SNUPN
SE_00_002401141 chr15:75627116-75649122 Sample_00_0024 Embryo mesendoderm 1141 3 530 50 1 66 575 IMP3,SNX33,PTPN9,SNUPN
SE_02_004800408 chr15:75627158-75649798 Sample_02_0048 Embryo endodermal CyT49_HE 408 3 543 50 1 90 715 IMP3,SNX33,PTPN9,SNUPN
SE_02_004500252 chr15:75627459-75649429 Sample_02_0045 Embryo endodermal CyT49_ES_D7 252 3 530 50 1 75 632 IMP3,SNX33,PTPN9,SNUPN
SE_02_004600716 chr15:75627672-75649178 Sample_02_0046 Embryo endodermal CyT49_ES_D10 716 3 521 50 1 66 583 IMP3,SNX33,PTPN9,SNUPN
SE_02_103100178 chr15:75627993-75707322 Sample_02_1031 Head and neck SCC1 contol 178 21 2198 149 4 558 3767 SNX33,IMP3,CSPG4,ODF3L1,SNUPN,PTPN9,DNM1P35
SE_02_078000700 chr15:75628110-75675645 Sample_02_0780 Liver SMMC-7721 700 16 1223 101 4 238 1655 SNX33,IMP3,CSPG4,ODF3L1,SNUPN,PTPN9

Genomic distribution of SEs associated with PTPN9

The strength of the tissue affected by the gene


Expression of PTPN9