Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000108671
Gene: PSMD11 Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:32444379-32483319 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104700106 chr17:32435512-32544234 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 106 41 2899 165 9 369 2471 CDK5R1,PSMD11,MYO1D
SE_02_071900631 chr17:32444339-32447453 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 631 1 81 1 0 36 162 PSMD11,CDK5R1
SE_02_104900259 chr17:32449210-32528929 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 259 51 2141 134 7 308 2290 CDK5R1,PSMD11,MYO1D
SE_02_058600153 chr17:32470180-32555807 Sample_02_0586 Chordal patient-derived chordoma MGH_4 153 21 2440 145 10 296 2117 CDK5R1,PSMD11,MYO1D
SE_02_104601427 chr17:32472070-32529964 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1427 15 1639 106 6 253 2117 CDK5R1,PSMD11,MYO1D
SE_02_104800281 chr17:32479374-32533763 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 281 26 1557 102 5 233 1906 CDK5R1,PSMD11,MYO1D
SE_02_085701034 chr17:32480299-32529938 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 1034 8 1436 100 5 221 1780 CDK5R1,PSMD11,MYO1D
SE_02_096300559 chr17:32480998-32520938 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 559 9 1125 88 5 198 1689 CDK5R1,PSMD11,MYO1D
SE_02_119300825 chr17:32481028-32521031 Sample_02_1193 Brain GBM27 825 9 1127 89 5 197 1688 CDK5R1,PSMD11,MYO1D
SE_02_117300833 chr17:32481068-32520738 Sample_02_1173 Brain GBM01 833 17 1117 88 5 197 1677 CDK5R1,PSMD11,MYO1D
SE_02_032000103 chr17:32481274-32529734 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 103 4 1410 100 5 188 1649 MYO1D,CDK5R1,PSMD11
SE_02_023400398 chr17:32481291-32559424 Sample_02_0234 Tonsil Th17 398 16 2255 138 9 237 1643 MYO1D,CDK5R1,PSMD11
SE_02_006000456 chr17:32481348-32520531 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 456 6 1111 88 5 179 1630 MYO1D,CDK5R1,PSMD11
SE_02_120500873 chr17:32481546-32522564 Sample_02_1205 Brain NB3 873 21 1163 89 5 178 1601 CDK5R1,PSMD11,MYO1D
SE_02_095600696 chr17:32481666-32505440 Sample_02_0956 Brain IDH1_2658 696 7 703 49 5 132 1577 CDK5R1,PSMD11,MYO1D
SE_02_156000190 chr17:32481823-32592047 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 190 21 3127 202 17 295 1557 CDK5R1,PSMD11,MYO1D
SE_02_032100084 chr17:32481890-32529094 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 84 4 1382 100 5 185 1545 MYO1D,CDK5R1,PSMD11
SE_02_078400079 chr17:32482200-32526047 Sample_02_0784 Blood OSU-CLL 79 10 1286 96 5 181 1521 CDK5R1,PSMD11,MYO1D
SE_02_027500188 chr17:32482340-32521899 Sample_02_0275 Retina FW14 188 5 1125 89 5 171 1508 MYO1D,CDK5R1,PSMD11
SE_02_027700195 chr17:32482342-32521626 Sample_02_0277 Retina FW18 195 4 1119 89 5 171 1508 MYO1D,CDK5R1,PSMD11
SE_01_008400352 chr17:32482379-32529851 Sample_01_0084 Spleen spleen 352 9 1390 100 5 179 1506 MYO1D,CDK5R1,PSMD11
SE_02_101700347 chr17:32482402-32579187 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 347 18 2775 184 15 251 1503 CDK5R1,PSMD11,MYO1D
SE_02_095500363 chr17:32482422-32494784 Sample_02_0955 Brain IDH1_2469 363 2 318 21 3 98 1436 CDK5R1,PSMD11,MYO1D
SE_02_104000360 chr17:32482435-32520383 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 360 10 1084 88 5 171 1500 CDK5R1,PSMD11,MYO1D
SE_02_104200213 chr17:32482467-32520720 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 213 13 1090 87 4 171 1495 CDK5R1,PSMD11,MYO1D
SE_02_044500613 chr17:32482477-32551710 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 613 20 2007 130 7 219 1493 CDK5R1,PSMD11,MYO1D
SE_02_121300934 chr17:32482542-32521823 Sample_02_1213 Brain GBM31 934 15 1119 88 4 171 1479 CDK5R1,PSMD11,MYO1D
SE_02_120400824 chr17:32482599-32521206 Sample_02_1204 Brain NB2 824 10 1101 88 4 171 1472 CDK5R1,PSMD11,MYO1D
SE_02_101300556 chr17:32482619-32496070 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 556 7 373 31 2 109 1469 CDK5R1,PSMD11,MYO1D
SE_02_120300848 chr17:32482736-32527422 Sample_02_1203 Brain NB1 848 17 1324 97 4 179 1461 CDK5R1,PSMD11,MYO1D
SE_02_096900537 chr17:32482768-32505300 Sample_02_0969 Brain H3.3K27M_PL637 537 7 681 48 4 125 1458 CDK5R1,PSMD11,MYO1D
SE_00_000900693 chr17:32482846-32529372 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 693 7 1374 99 4 179 1436 MYO1D,CDK5R1,PSMD11
SE_02_108300991 chr17:32482897-32531143 Sample_02_1083 Macula macula 991 12 1405 99 4 179 1433 CDK5R1,PSMD11,MYO1D
SE_02_078300102 chr17:32482909-32529992 Sample_02_0783 Blood MEC2 102 16 1383 99 4 179 1433 CDK5R1,PSMD11,MYO1D
SE_02_061100366 chr17:32482964-32525880 Sample_02_0611 Liposarcoma DDLPS_T1 366 14 1263 95 4 177 1432 CDK5R1,PSMD11,MYO1D
SE_02_108200964 chr17:32483025-32504644 Sample_02_1082 Retina retina 964 8 643 48 4 125 1424 CDK5R1,PSMD11,MYO1D
SE_02_096600753 chr17:32483025-32505395 Sample_02_0966 Brain H3.3K27M_JN29-BS3 753 3 674 48 4 125 1424 CDK5R1,PSMD11,MYO1D
SE_02_023300627 chr17:32483061-32533834 Sample_02_0233 Tonsil Th1 627 12 1483 101 4 182 1417 MYO1D,CDK5R1,PSMD11
SE_02_117900602 chr17:32483063-32505219 Sample_02_1179 Brain GBM08 602 7 670 48 4 125 1416 CDK5R1,PSMD11,MYO1D
SE_02_044401001 chr17:32483075-32529047 Sample_02_0444 Bone osteosarcoma tumor P10 1001 15 1362 99 4 179 1416 CDK5R1,PSMD11,MYO1D
SE_02_037200063 chr17:32483107-32533872 Sample_02_0372 Skeletal muscle RMS008 63 9 1482 101 4 182 1411 MYO1D,CDK5R1,PSMD11
SE_02_155900616 chr17:32483255-32520375 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 616 12 1067 87 4 171 1401 CDK5R1,PSMD11,MYO1D
SE_02_121200780 chr17:32483273-32520520 Sample_02_1212 Brain GBM30 780 8 1072 87 4 171 1397 CDK5R1,PSMD11,MYO1D
SE_01_011500303 chr17:32483318-32527413 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 303 12 1311 97 4 179 1397 CDK5R1,PSMD11,MYO1D
SE_02_039600798 chr17:32483330-32505539 Sample_02_0396 Skin NHEK-D 798 7 675 48 4 125 1393 MYO1D,CDK5R1,PSMD11
SE_02_078200060 chr17:32483340-32530049 Sample_02_0782 Blood MEC1 60 16 1377 99 4 179 1393 CDK5R1,MYO1D,PSMD11
SE_02_059100252 chr17:32483343-32520750 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 252 10 1075 87 4 171 1393 CDK5R1,MYO1D,PSMD11
SE_00_005500509 chr17:32483347-32524577 Sample_00_0055 Spleen spleen 34y 509 14 1203 93 4 173 1393 CDK5R1,MYO1D,PSMD11,C17orf75
SE_02_118400408 chr17:32483354-32523359 Sample_02_1184 Brain GBM13 408 13 1164 91 4 171 1393 CDK5R1,MYO1D,PSMD11
SE_02_118701010 chr17:32483367-32523475 Sample_02_1187 Brain GBM16 1010 9 1169 93 4 171 1391 CDK5R1,MYO1D,PSMD11
SE_02_002300562 chr17:32483380-32506509 Sample_02_0023 Blood CD8donorC 562 8 703 52 4 125 1390 MYO1D,CDK5R1,PSMD11
SE_02_104300513 chr17:32483385-32528345 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 513 27 1333 98 4 179 1390 CDK5R1,MYO1D,PSMD11
SE_02_095800239 chr17:32483390-32548378 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 239 18 1883 124 5 217 1390 CDK5R1,MYO1D,PSMD11
SE_02_100900287 chr17:32483397-32505288 Sample_02_1009 Brain Lateral temporal lobe_2T_AD 287 5 665 48 4 125 1389 CDK5R1,MYO1D,PSMD11
SE_02_101400147 chr17:32483398-32496838 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 147 3 387 33 2 117 1389 CDK5R1,MYO1D,PSMD11
SE_02_107800328 chr17:32483398-32534521 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 328 14 1491 101 4 182 1389 CDK5R1,MYO1D,PSMD11
SE_02_104400060 chr17:32483407-32528862 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 60 14 1350 99 4 179 1388 CDK5R1,MYO1D,PSMD11
SE_02_100600175 chr17:32483414-32495363 Sample_02_1006 Brain Lateral temporal lobe_13T_Old 175 4 319 22 2 108 1387 CDK5R1,MYO1D,PSMD11
SE_02_005800503 chr17:32483431-32520102 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 503 5 1059 86 4 170 1385 MYO1D,CDK5R1,PSMD11
SE_02_155300349 chr17:32483433-32523183 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 349 23 1160 91 4 171 1384 CDK5R1,MYO1D,PSMD11
SE_02_088601482 chr17:32483470-32520854 Sample_02_0886 Skin foreskin_ p63KLF4 1482 8 1076 87 4 171 1373 CDK5R1,MYO1D,PSMD11
SE_02_034800576 chr17:32483487-32520443 Sample_02_0348 Peripheral blood CUTLL1_wild-type 576 7 1066 87 4 171 1367 MYO1D,CDK5R1,PSMD11
SE_02_118200304 chr17:32483584-32529465 Sample_02_1182 Brain GBM11 304 13 1359 99 4 179 1365 CDK5R1,MYO1D,PSMD11
SE_02_097000104 chr17:32483587-32551770 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 104 28 1989 131 7 219 1365 CDK5R1,MYO1D,PSMD11
SE_02_096200378 chr17:32483688-32505563 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 378 7 665 48 4 122 1365 CDK5R1,MYO1D,PSMD11
SE_02_018400026 chr17:32483695-32538083 Sample_02_0184 Skin SKMEL30 26 12 1596 111 4 197 1365 MYO1D,CDK5R1,PSMD11
SE_02_045400517 chr17:32483749-32537815 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 517 11 1589 110 4 197 1365 CDK5R1,MYO1D,PSMD11
SE_02_142900547 chr17:32483784-32537280 Sample_02_1429 Blood GM12878_WT 547 9 1572 109 4 195 1365 CDK5R1,MYO1D,PSMD11,ZNF207,C17orf75,UTP6
SE_00_005601201 chr17:32484074-32524551 Sample_00_0056 Sigmoid colon sigmoid colon 3y 1201 10 1184 93 4 168 1365 CDK5R1,MYO1D,PSMD11
SE_02_100500284 chr17:32484132-32495741 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 284 2 321 28 2 103 1365 CDK5R1,MYO1D,PSMD11
SE_02_101100231 chr17:32484148-32495021 Sample_02_1011 Brain Lateral temporal lobe_5T_AD 231 2 289 22 2 103 1343 CDK5R1,MYO1D,PSMD11
SE_02_013200631 chr17:32485758-32534027 Sample_02_0132 Lung 1015_CL 631 6 1427 101 4 177 1365 MYO1D,CDK5R1,PSMD11
SE_02_044100016 chr17:32485832-32525809 Sample_02_0441 Bone M112 16 21 1200 93 3 172 1365 CDK5R1,MYO1D,PSMD11
SE_02_012000021 chr17:32486107-32525787 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 21 3 1191 93 3 172 1365 MYO1D,CDK5R1,PSMD11
SE_02_149300296 chr17:32487057-32538044 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 296 10 1516 106 3 190 1324 CDK5R1,MYO1D,PSMD11
SE_02_013100826 chr17:32487062-32526238 Sample_02_0131 Lung 1015_PT 826 6 1185 90 3 167 1321 MYO1D,CDK5R1,PSMD11
SE_02_018500368 chr17:32487077-32498449 Sample_02_0185 Skin UACC257 368 2 360 31 1 107 1314 MYO1D,CDK5R1,PSMD11
SE_02_028800409 chr17:32487146-32525335 Sample_02_0288 Tonsil CB5_H3K27Ac 409 6 1150 90 3 161 1296 MYO1D,CDK5R1,PSMD11
SE_02_096100022 chr17:32488147-32551389 Sample_02_0961 Brain H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells 22 14 1876 124 6 167 1035 CDK5R1,MYO1D,PSMD11
SE_02_043900088 chr17:32488635-32525642 Sample_02_0439 Bone Hu09 88 16 1133 89 3 115 966 CDK5R1,MYO1D,PSMD11
SE_02_076201640 chr17:32488725-32570059 Sample_02_0762 Podocyte podocyte_CTL 1640 12 2408 163 12 185 949 CDK5R1,MYO1D,PSMD11
SE_00_003900439 chr17:32491282-32524679 Sample_00_0039 Spleen spleen_3y 439 6 1023 84 3 90 572 MYO1D,CDK5R1,PSMD11
SE_00_002700762 chr17:32491573-32529314 Sample_00_0027 Blood natural-killer-cell 762 6 1168 89 3 95 546 MYO1D,CDK5R1,PSMD11
SE_02_038700123 chr17:32492107-32527155 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 123 21 1093 86 3 95 546 MYO1D,CDK5R1,PSMD11
SE_02_139300219 chr17:32493265-32528781 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 219 10 1103 83 2 89 429 MYO1D,PSMD11,CDK5R1
SE_02_044000249 chr17:32493524-32526012 Sample_02_0440 Bone LM7 249 15 1009 77 2 84 368 MYO1D,PSMD11,CDK5R1
SE_02_048101398 chr17:32494357-32521734 Sample_02_0481 Mammary gland MDA-MB231 1398 10 816 69 2 75 170 MYO1D,PSMD11,CDK5R1

Genomic distribution of SEs associated with PSMD11

The strength of the tissue affected by the gene


Expression of PSMD11