SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000231924
Gene: PSG1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:42866464-42879822 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_087800150 chr19:42788365-42858638 Sample_02_0878 Ovary SVOG3e cells_noDox_control 150 13 3456 311 0 2 1044 PSG10P,LOC100289650,PSG1,PSG3,PSG8
SE_02_050000212 chr19:42789485-42858726 Sample_02_0500 Fetal lung IMR90_#2 212 26 3376 307 0 2 1044 PSG10P,LOC100289650,PSG1,PSG3,PSG8,PSG6
SE_02_049900185 chr19:42789657-42854141 Sample_02_0499 Fetal lung IMR90 IR Senescence 185 20 3023 275 0 0 900 PSG10P,LOC100289650,PSG1,PSG3,PSG8,PSG6
SE_02_044300133 chr19:42791719-42858562 Sample_02_0443 Bone MG63 133 31 3279 301 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_087900159 chr19:42792635-42858947 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 159 14 3256 299 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_127900608 chr19:42792941-42859076 Sample_02_1279 Bone Mesenchymal stem cells 608 14 3248 299 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_063600074 chr19:42793028-42854121 Sample_02_0636 Skin BJ5ta 74 16 2890 265 0 0 898 PSG10P,LOC100289650,PSG8,PSG1
SE_02_088100233 chr19:42793728-42858828 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 233 13 3217 298 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_127200015 chr19:42793746-42858272 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 15 26 3184 293 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_088300196 chr19:42793754-42858652 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 196 12 3211 296 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_144900053 chr19:42793898-42858122 Sample_02_1449 Adipose SW872_YAP_TFE3 53 16 3169 293 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_144400075 chr19:42794114-42858763 Sample_02_1444 Adipose SW872_Empty Vector 75 11 3204 297 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_026300632 chr19:42811118-42854038 Sample_02_0263 Osteoblastic hFOB_undifferentiated 632 8 2171 209 0 0 886 PSG10,LOC100289650,PSG8,PSG1
SE_02_088600417 chr19:42811429-42858846 Sample_02_0886 Skin foreskin_ p63KLF4 417 10 2512 242 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_086901068 chr19:42811670-42854010 Sample_02_0869 Fibroblast VH10_NO_UV 1068 19 2140 207 0 0 881 PSG10P,LOC100289650,PSG8,PSG1
SE_02_156600445 chr19:42811762-42858752 Sample_02_1566 Dermal Dermal fibroblast 445 11 2492 239 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_056900518 chr19:42813339-42858120 Sample_02_0569 Periodontal ligament mesenchymal stem cell 518 18 2353 228 0 2 1044 PSG10P,LOC100289650,PSG8,PSG1
SE_02_076200579 chr19:42815783-42836558 Sample_02_0762 Podocyte podocyte_CTL 579 1 997 105 0 0 505 LOC100289650,PSG10P,PSG1
SE_02_127100130 chr19:42816363-42858924 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 130 9 2261 216 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_072700916 chr19:42816480-42834563 Sample_02_0727 Fetal lung IMR90_Etoposide 916 3 877 96 0 0 505 LOC100289650,PSG10P,PSG1,PSG8,PSG6,PSG3
SE_02_116700314 chr19:42816536-42858546 Sample_02_1167 Biliary H69_TGF Vehicle_1 314 10 2242 213 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_139900312 chr19:42816560-42854951 Sample_02_1399 Bone U2OS_siMLL3.1 312 11 1956 186 0 0 947 PSG10P,LOC100289650,PSG1
SE_02_158400128 chr19:42816595-42855047 Sample_02_1584 Brain U87 GBM_Mock 128 7 1959 188 0 0 947 PSG10P,LOC100289650,PSG1
SE_02_113700162 chr19:42816641-42858829 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 162 7 2252 214 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_141800260 chr19:42816661-42853926 Sample_02_1418 Brain SF9427 260 8 1881 180 0 0 864 PSG10P,LOC100289650,PSG1
SE_02_071300127 chr19:42816744-42859089 Sample_02_0713 Pancreas BxPC3_sgTP63 127 14 2255 214 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_049200716 chr19:42816939-42858579 Sample_02_0492 Pharyng Detroit 562_LPS 716 10 2229 212 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_061500375 chr19:42817410-42858425 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 375 9 2205 211 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_049100665 chr19:42817561-42858564 Sample_02_0491 Pharyng Detroit 562-Control 665 10 2208 210 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_139000004 chr19:42817564-42833760 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 4 6 800 84 0 0 505 LOC100289650,PSG10P,PSG1
SE_02_113800856 chr19:42818594-42858610 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 856 9 2155 206 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_144600187 chr19:42818643-42834286 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 187 5 773 85 0 0 505 LOC100289650,PSG10P,PSG1
SE_02_102501004 chr19:42818895-42858665 Sample_02_1025 Esophagus KYSE150 1004 10 2144 206 0 2 1044 PSG10P,LOC100289650,PSG1
SE_02_038000424 chr19:42819046-42858772 Sample_02_0380 Skeletal muscle RH18 424 9 2141 205 0 2 1044 PSG10,LOC100289650,PSG1
SE_02_105400787 chr19:42826629-42835237 Sample_02_1054 Esophagus SKGT4 787 3 414 47 0 0 55 LOC100289650,PSG10P,PSG1
SE_04_000800174 chr19:42828454-42853766 Sample_04_0008 Lung A549 shRNA control 174 6 1277 118 0 0 343 PSG10P,LOC100289650,PSG1
SE_02_058900284 chr19:42830506-42853766 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 284 8 1203 111 0 0 343 PSG10P,LOC100289650,PSG1
SE_02_041500519 chr19:42830694-42834377 Sample_02_0415 Stomach YCC22 519 1 187 22 0 0 0 LOC100289650,PSG10,PSG1
SE_02_076200453 chr19:42841880-42859359 Sample_02_0762 Podocyte podocyte_CTL 453 1 1061 90 0 2 391 PSG10P,LOC100289650,PSG1
SE_02_031700458 chr19:42843326-42859337 Sample_02_0317 Neuroblastoma GICAN 458 1 1007 86 0 2 391 PSG10,LOC100289650,PSG1
SE_02_086701250 chr19:42843870-42858122 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1250 9 918 79 0 2 391 PSG10P,LOC100289650,PSG1
SE_02_026900178 chr19:42844214-42852876 Sample_02_0269 Kidney HK-2 178 3 495 38 0 0 188 PSG10,LOC100289650,PSG1
SE_02_061000095 chr19:42844669-42858913 Sample_02_0610 Liposarcoma MLS 1765-92 95 1 903 82 0 2 318 PSG10P,LOC100289650,PSG1
SE_02_060500207 chr19:42844972-42855855 Sample_02_0605 Skin Skin Fibroblast_DMSO 207 1 656 59 0 0 259 PSG10P,LOC100289650,PSG1
SE_02_060600188 chr19:42845123-42855922 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 188 1 646 59 0 1 245 PSG10P,LOC100289650,PSG1
SE_02_045100176 chr19:42845249-42858820 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 176 1 851 79 0 2 222 PSG10P,LOC100289650,PSG1
SE_02_108500543 chr19:42845987-42854117 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 543 4 462 42 0 0 50 PSG10P,LOC100289650,PSG1
SE_02_154900345 chr19:42846623-42855047 Sample_02_1549 Gastrointestinal Stromal GIST-430B 345 1 476 47 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_076300475 chr19:42846923-42859258 Sample_02_0763 Podocyte podocyte_DEX 475 1 778 73 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_045200533 chr19:42847114-42855022 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 533 1 455 43 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_114900277 chr19:42847441-42858668 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 277 2 732 71 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_116800821 chr19:42847489-42854951 Sample_02_1168 Biliary H69_TGF Vehicle_2 821 1 436 43 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_116900813 chr19:42847604-42858370 Sample_02_1169 Biliary H69_TGF beta_16h_2 813 3 704 68 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_116600816 chr19:42847659-42857927 Sample_02_1166 Biliary H69_TGF beta_16h_1 816 3 669 66 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_136101138 chr19:42848141-42854616 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 1138 1 363 35 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_147100825 chr19:42848336-42858733 Sample_02_1471 Blood Outgrowth Endothelia BOEC 825 2 669 61 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_064200626 chr19:42848393-42857852 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 626 4 611 56 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_072700213 chr19:42848448-42854074 Sample_02_0727 Fetal lung IMR90_Etoposide 213 1 315 28 0 0 48 PSG10P,LOC100289650,PSG1
SE_02_158200202 chr19:42848555-42858406 Sample_02_1582 Renal OS-RC-2 202 3 640 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_158100338 chr19:42848571-42854887 Sample_02_1581 Renal OS-LM1 338 2 363 33 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_124000610 chr19:42848634-42853959 Sample_02_1240 Skin MCC13_virus_negative 610 1 292 28 0 0 30 PSG10P,LOC100289650,PSG1
SE_02_064300886 chr19:42848697-42857774 Sample_02_0643 Mammary gland MDA-MB-436 886 4 592 55 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_088000603 chr19:42848734-42858738 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 603 3 647 61 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_132201379 chr19:42848738-42854002 Sample_02_1322 Connective Tissue HT1080_WT 1379 2 292 28 0 0 32 PSG10P,LOC100289650,PSG1
SE_02_132801053 chr19:42848776-42858914 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1053 5 652 62 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_005400711 chr19:42848990-42854083 Sample_02_0054 Lung IMR-90_DMSO_1 711 1 290 28 0 0 48 PSG10,LOC100289650,PSG1
SE_02_105400783 chr19:42848997-42854106 Sample_02_1054 Esophagus SKGT4 783 2 293 28 0 0 49 PSG10P,LOC100289650,PSG1
SE_02_144600233 chr19:42848998-42854162 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 233 2 296 29 0 0 55 PSG10P,LOC100289650,PSG1
SE_02_088200583 chr19:42849094-42855074 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 583 1 343 35 0 0 99 PSG10P,LOC100289650,PSG1
SE_02_005500807 chr19:42849161-42854045 Sample_02_0055 Lung IMR-90_Nutlin-3a 807 1 279 28 0 0 40 PSG10,LOC100289650,PSG1
SE_02_145201062 chr19:42849416-42853885 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1062 1 246 27 0 0 13 PSG10P,LOC100289650,PSG1
SE_02_145500887 chr19:42849548-42853948 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 887 1 242 27 0 0 28 PSG10P,LOC100289650,PSG1
SE_02_093800841 chr19:42849662-42853813 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 841 1 224 26 0 0 0 PSG10P,LOC100289650,PSG1
SE_02_145400684 chr19:42849679-42858747 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 684 3 598 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_071201098 chr19:42849698-42858907 Sample_02_0712 Pancreas BxPC3_sgNEG 1098 3 604 60 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_093900307 chr19:42849727-42853995 Sample_02_0939 Mammary gland MDA-MB-231_control 307 1 239 26 0 0 32 PSG10P,LOC100289650,PSG1
SE_02_137901015 chr19:42849824-42853772 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1015 3 210 24 0 0 0 PSG10P,LOC100289650,PSG1
SE_02_132001492 chr19:42849824-42853888 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1492 1 224 25 0 0 13 PSG10P,LOC100289650,PSG1
SE_02_048001280 chr19:42849901-42859177 Sample_02_0480 Gingival epithelial HGEP 1280 3 603 59 0 2 196 PSG10P,LOC100289650,PSG1
SE_02_072600465 chr19:42850240-42853945 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 465 4 204 23 0 0 27 PSG10P,LOC100289650,PSG1
SE_02_139000737 chr19:42850335-42853895 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 737 1 199 23 0 0 14 PSG10P,LOC100289650,PSG1
SE_02_060501360 chr19:42896302-42901588 Sample_02_0605 Skin Skin Fibroblast_DMSO 1360 1 259 16 0 0 0 PSG6,PSG10P,PSG7,PSG1
SE_02_060601223 chr19:42896509-42901629 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 1223 1 242 15 0 0 0 PSG6,PSG10P,PSG7,PSG1
SE_02_061001555 chr19:42896867-42901748 Sample_02_0610 Liposarcoma MLS 1765-92 1555 1 232 15 0 0 0 PSG6,PSG10P,PSG7,PSG1
SE_02_144000066 chr19:42898085-42917825 Sample_02_1440 Cytotrophoblast Cytotrophoblast 66 5 1164 83 1 3 553 PSG6,PSG10P,PSG7,PSG1
SE_02_061000591 chr19:42912537-42921686 Sample_02_0610 Liposarcoma MLS 1765-92 591 1 659 71 0 4 193 PSG6,PSG7,PSG1
SE_02_076200464 chr19:42912853-42937720 Sample_02_0762 Podocyte podocyte_CTL 464 1 1673 152 0 4 838 PSG6,PSG7,PSG1
SE_02_112100458 chr19:42912871-42940896 Sample_02_1121 Neonatal foreskin keratinocytes_Mi2KD 458 9 1946 175 0 4 838 PSG6,PSG7,PSG1
SE_02_048000708 chr19:42913975-42941338 Sample_02_0480 Gingival epithelial HGEP 708 11 1908 174 0 4 838 PSG6,PSG7,PSG1
SE_02_045100017 chr19:42914039-42994075 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 17 22 4302 443 2 4 838 PSG6,PSG7,PSG1,PSG11
SE_02_076300759 chr19:42914108-42936417 Sample_02_0763 Podocyte podocyte_DEX 759 2 1478 141 0 4 743 PSG6,PSG7,PSG1
SE_02_050001246 chr19:42914128-42941778 Sample_02_0500 Fetal lung IMR90_#2 1246 9 1923 175 0 4 838 PSG6,PSG7,PSG1
SE_02_127900431 chr19:42914136-42989685 Sample_02_1279 Bone Mesenchymal stem cells 431 21 4103 424 1 4 838 PSG6,PSG7,PSG1,PSG11
SE_02_059000615 chr19:42914138-42935252 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 615 7 1436 130 0 4 589 PSG6,PSG7,PSG1
SE_02_136000543 chr19:42914154-42964366 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 543 14 3069 291 1 4 838 PSG6,PSG7,PSG1
SE_02_049901212 chr19:42914165-42942357 Sample_02_0499 Fetal lung IMR90 IR Senescence 1212 8 1960 181 0 4 838 PSG6,PSG7,PSG1
SE_02_132800342 chr19:42915200-42942678 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 342 8 1905 174 0 4 838 PSG6,PSG7,PSG1
SE_02_127800103 chr19:42919368-42958121 Sample_02_1278 Chordoma UCH1_DMSO_48h 103 9 2381 209 0 0 645 PSG7,PSG6,PSG1
SE_02_145400332 chr19:42921326-42940939 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 332 4 1323 109 0 0 645 PSG7,PSG6,PSG1
SE_02_087800026 chr19:42922624-42996828 Sample_02_0878 Ovary SVOG3e cells_noDox_control 26 17 3800 386 2 0 645 PSG7,PSG6,PSG1,PSG11
SE_02_087900024 chr19:42922828-42999606 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 24 19 3881 390 2 0 645 PSG7,PSG6,PSG1,PSG11
SE_02_031700775 chr19:42927309-42943314 Sample_02_0317 Neuroblastoma GICAN 775 1 1104 103 0 0 355 PSG7,PSG6,PSG1
SE_02_061000184 chr19:42928473-42940372 Sample_02_0610 Liposarcoma MLS 1765-92 184 1 860 80 0 0 355 PSG7,PSG6,PSG1
SE_02_060500347 chr19:42928501-42937280 Sample_02_0605 Skin Skin Fibroblast_DMSO 347 1 582 56 0 0 340 PSG7,PSG6,PSG1
SE_02_060600295 chr19:42928564-42937290 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 295 1 583 56 0 0 341 PSG7,PSG6,PSG1
SE_02_156600641 chr19:42929032-42937243 Sample_02_1566 Dermal Dermal fibroblast 641 1 539 51 0 0 333 PSG7,PSG6,PSG1,PSG8,PSG2,PSG11
SE_02_045200831 chr19:42929107-42937340 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 831 1 544 51 0 0 352 PSG7,PSG6,PSG1
SE_02_113700478 chr19:42929227-42937614 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 478 1 557 51 0 0 355 PSG7,PSG6,PSG1
SE_02_088200497 chr19:42929339-42936431 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 497 1 437 45 0 0 241 PSG7,PSG6,PSG1
SE_02_026500468 chr19:42929472-42938477 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 468 1 621 55 0 0 311 PSG7,PSG6,PSG1
SE_02_127100784 chr19:42929524-42936735 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 784 1 441 49 0 0 211 PSG7,PSG6,PSG1
SE_02_158400361 chr19:42929536-42937389 Sample_02_1584 Brain U87 GBM_Mock 361 1 507 50 0 0 302 PSG7,PSG6,PSG1
SE_02_088601842 chr19:42929601-42935583 Sample_02_0886 Skin foreskin_ p63KLF4 1842 1 381 38 0 0 98 PSG7,PSG6,PSG1
SE_02_063600070 chr19:42929604-43006333 Sample_02_0636 Skin BJ5ta 70 14 3724 381 2 0 296 PSG7,PSG6,PSG1,PSG11
SE_02_158200212 chr19:42929628-42937390 Sample_02_1582 Renal OS-RC-2 212 1 503 50 0 0 291 PSG7,PSG6,PSG1
SE_02_086901024 chr19:42929631-42991293 Sample_02_0869 Fibroblast VH10_NO_UV 1024 22 3107 336 1 0 291 PSG7,PSG6,PSG1,PSG11
SE_02_154900363 chr19:42929676-42937484 Sample_02_1549 Gastrointestinal Stromal GIST-430B 363 1 500 49 0 0 281 PSG7,PSG6,PSG1
Genomic distribution of SEs associated with PSG1
Genome Browser

The strength of the tissue affected by the gene

Expression of PSG1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)