SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000214456
Gene: PLIN5 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:4522531-4535224 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_077501358 chr19:4461037-4497487 Sample_02_0775 Pancreas EndoC-BH1_SE 1358 7 1203 118 7 55 1130 HDGFRP2,PLIN4,UBXN6,LRG1,MIR4746,PLIN5
SE_02_104901527 chr19:4466694-4494682 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1527 17 895 90 7 55 894 HDGFRP2,PLIN4,UBXN6,LRG1,MIR4746,PLIN5
SE_00_004600829 chr19:4500996-4520294 Sample_00_0046 Heart right ventricle_34y 829 7 1114 52 5 53 2055 PLIN4,HDGFRP2,UBXN6,LRG1,PLIN5,SEMA6B
SE_02_033200435 chr19:4536075-4546697 Sample_02_0332 Haematopoietic and lymphoid tissue MOLM14_DMSO_9 435 2 364 19 0 91 1309 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_153900407 chr19:4536104-4598651 Sample_02_1539 Nasopharyngeal C666-1 407 23 2002 77 3 214 2765 SEMA6B,LRG1,TNFAIP8L1,PLIN4,PLIN5
SE_02_033300286 chr19:4536305-4545795 Sample_02_0333 Haematopoietic and lymphoid tissue MOLM14_DMSO_10 286 2 322 16 0 85 1165 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_025600349 chr19:4536602-4576015 Sample_02_0256 Peripheral blood MV411 349 8 1339 45 3 161 2765 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_153100709 chr19:4536730-4569945 Sample_02_1531 Peripheral blood neutrophils_0B9ZK 709 11 1112 39 3 158 2765 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_134500204 chr19:4536917-4575293 Sample_02_1345 Leukophereses leukophereses_p358 204 13 1304 44 3 159 2765 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_133100517 chr19:4537043-4546079 Sample_02_1331 Blood Molm13_CTRL 517 4 306 15 0 85 1162 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_046000158 chr19:4537113-4584717 Sample_02_0460 Blood ME-1_I-10-49_6h 158 12 1551 57 3 186 2738 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_138100375 chr19:4537247-4598458 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 375 22 1959 74 3 213 2714 SEMA6B,LRG1,TNFAIP8L1,PLIN4,PLIN5
SE_02_057500232 chr19:4537298-4612680 Sample_02_0575 Blood MOLM13_sgLKB1e2 232 19 2413 99 3 223 2704 SEMA6B,LRG1,TNFAIP8L1,PLIN4,PLIN5
SE_02_099500383 chr19:4537675-4547415 Sample_02_0995 Blood MOLM-13_empty vector 383 4 328 14 0 91 1182 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_025500449 chr19:4537713-4544885 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 449 1 248 12 0 85 1029 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_058100276 chr19:4537844-4545925 Sample_02_0581 Blood MOLM13_empty_HG 276 2 277 13 0 85 1004 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_033500348 chr19:4538157-4546012 Sample_02_0335 Haematopoietic and lymphoid tissue MOLM14_CA25_12 348 1 259 13 0 77 933 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_058200345 chr19:4538402-4546270 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 345 2 258 13 0 79 950 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_057700399 chr19:4538819-4545835 Sample_02_0577 Blood MOLM13_empty 399 1 213 10 0 65 784 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_057800448 chr19:4538881-4545872 Sample_02_0578 Blood MOLM-13_sgSIK3e4 448 1 211 10 0 65 769 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_057400757 chr19:4538949-4545781 Sample_02_0574 Blood MOLM-13_sgNeg2 757 2 206 10 0 65 756 SEMA6B,LRG1,PLIN4,PLIN5
SE_00_005501088 chr19:4538962-4544308 Sample_00_0055 Spleen spleen 34y 1088 1 161 9 0 57 657 SEMA6B,LRG1,PLIN4,PLIN5,TNFAIP8L1,CHAF1A,FSD1,HDGFRP2,TMIGD2
SE_02_033700570 chr19:4539037-4568608 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 570 4 961 31 3 137 2349 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_099400225 chr19:4539110-4612408 Sample_02_0994 Blood MOLM13_SIK3TQ 225 16 2304 92 3 203 2339 SEMA6B,LRG1,TNFAIP8L1,PLIN4,PLIN5
SE_02_109800602 chr19:4539195-4544778 Sample_02_1098 Blood THP1_DMSO_noPMA 602 1 164 7 0 65 736 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_099300352 chr19:4539270-4547097 Sample_02_0993 Blood MOLM-13_empty 352 2 236 9 0 70 880 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_046100383 chr19:4539518-4545683 Sample_02_0461 Blood MV-4-11-B cells 383 2 178 7 0 64 736 SEMA6B,LRG1,PLIN4,PLIN5
SE_02_134800206 chr19:4540241-4569014 Sample_02_1348 Leukophereses leukophereses_p408 206 6 927 28 3 132 2247 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_134700338 chr19:4540978-4546362 Sample_02_1347 Leukophereses leukophereses_p401 338 3 159 5 0 61 736 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_077500980 chr19:4543039-4665686 Sample_02_0775 Pancreas EndoC-BH1_SE 980 41 3758 185 4 220 3498 TNFAIP8L1,MYDGF,SEMA6B,PLIN4,DPP9-AS1,LRG1,PLIN5,C19orf10
SE_02_095000383 chr19:4547637-4584974 Sample_02_0950 Umbilical vein HUVEC_WT 383 19 1209 41 3 105 1456 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_151900072 chr19:4550542-4581321 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 72 22 992 26 3 75 1173 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_102900328 chr19:4555009-4648842 Sample_02_1029 Colon HCT116 328 37 2824 125 1 99 1038 TNFAIP8L1,SEMA6B,PLIN4,DPP9-AS1,MYDGF,LRG1,PLIN5
SE_02_154101035 chr19:4555221-4598647 Sample_02_1541 Nasopharyngeal HNE1 1035 11 1330 50 0 79 749 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_050600542 chr19:4555495-4598928 Sample_02_0506 Esophagus TE5_1 542 11 1331 50 0 78 680 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_051700536 chr19:4555496-4598927 Sample_02_0517 Esophagus TE5 536 12 1330 50 0 78 680 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_042200540 chr19:4555577-4585255 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 540 5 915 35 0 62 665 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_050500557 chr19:4555751-4598867 Sample_02_0505 Esophagus KYSE70_1 557 17 1320 50 0 75 630 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_051600560 chr19:4555751-4598867 Sample_02_0516 Esophagus KYSE70 560 18 1320 50 0 75 630 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_151800076 chr19:4555885-4581278 Sample_02_1518 Umbilical vein HUVEC_Scr 76 19 805 24 0 40 602 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_146900152 chr19:4555933-4585141 Sample_02_1469 Umbilical Vein HUVEC 152 13 899 33 0 60 589 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_087400297 chr19:4556906-4584972 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 297 9 876 33 0 55 465 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_133400109 chr19:4556938-4598684 Sample_02_1334 Lung NCI-H1299_mutSMARCA4 109 10 1286 50 0 73 459 SEMA6B,TNFAIP8L1,PLIN4,LRG1,PLIN5
SE_02_083700148 chr19:4556956-4658973 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 148 26 3081 160 1 112 1603 TNFAIP8L1,MYDGF,SEMA6B,PLIN4,DPP9-AS1,LRG1,PLIN5
SE_02_087200463 chr19:4557035-4583674 Sample_02_0872 Colon HCT116_siCtrl-5FU 463 7 845 31 0 42 441 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_152000073 chr19:4557328-4581313 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 73 12 778 24 0 35 358 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_083200208 chr19:4557394-4584601 Sample_02_0832 Umblical vein HUVECs_TNF30min 208 12 856 31 0 42 341 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_010300478 chr19:4557518-4576346 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 478 3 636 19 0 17 339 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_058500573 chr19:4557562-4584563 Sample_02_0585 Umbilical vein HUVEC 0hour 573 10 846 31 0 42 339 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_147100665 chr19:4557579-4576232 Sample_02_1471 Blood Outgrowth Endothelia BOEC 665 5 631 19 0 17 339 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_130800442 chr19:4557700-4581393 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 442 7 765 24 0 35 339 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_131500321 chr19:4557840-4584861 Sample_02_1315 Brain hMGLs_INPP5D SNP 321 8 846 32 0 50 337 SEMA6B,PLIN4,PLIN5,LRG1
SE_02_083600186 chr19:4558853-4660952 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 186 23 3112 164 1 102 1455 TNFAIP8L1,MYDGF,SEMA6B,PLIN4,DPP9-AS1,LRG1,PLIN5
SE_02_131700459 chr19:4560984-4570910 Sample_02_1317 Brain hMGLs_SORL1-KO 459 6 344 9 0 1 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_131300675 chr19:4561473-4584734 Sample_02_1313 Brain hMGLs_CD33_SNP 675 6 743 28 0 29 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_131400378 chr19:4561508-4584644 Sample_02_1314 Brain hMGLs_TREM2-KO 378 11 739 27 0 29 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_083100789 chr19:4562029-4584619 Sample_02_0831 Umblical vein HUVECs_TNF0min 789 11 729 27 0 29 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_063200483 chr19:4563407-4607569 Sample_02_0632 Gastrointestinal Stromal GIST-48B_DMSO 483 16 1370 48 0 66 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_063300437 chr19:4563616-4607269 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 437 15 1354 48 0 66 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_037800091 chr19:4564554-4607859 Sample_02_0378 Skeletal muscle SCMC 91 7 1328 49 0 66 0 PLIN4,TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_038000441 chr19:4564624-4598024 Sample_02_0380 Skeletal muscle RH18 441 5 1038 41 0 51 0 PLIN4,TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_130900869 chr19:4565155-4581337 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 869 4 529 16 0 22 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_107800418 chr19:4565161-4607303 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 418 19 1289 46 0 66 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_108000374 chr19:4565165-4599056 Sample_02_1080 Muscle JR1 shCtrl 374 16 1042 41 0 59 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_141300520 chr19:4565172-4615957 Sample_02_1413 Muscle RH4_sgBRG1 520 15 1599 76 0 66 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_107900426 chr19:4565470-4607578 Sample_02_1079 Muscle RMS246_PAX3-NCOA1 426 16 1290 47 0 66 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_108100438 chr19:4565575-4599288 Sample_02_1081 Muscle CTR shCtrl 438 17 1036 41 0 60 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_01_002100772 chr19:4566055-4598894 Sample_01_0021 Skin bipolar-neuron 772 6 1007 41 0 57 0 PLIN4,TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_037500108 chr19:4566064-4617643 Sample_02_0375 Skeletal muscle RMS216 108 14 1637 82 0 66 0 PLIN4,TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_114200300 chr19:4566420-4585207 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 300 9 587 25 0 42 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_074000627 chr19:4567041-4600733 Sample_02_0740 Muscle RH3 627 15 1040 40 0 60 0 TNFAIP8L1,PLIN4,LRG1,PLIN5,SEMA6B
SE_02_133300151 chr19:4567060-4585168 Sample_02_1333 Lung NCI-H1299_wtSMARCA4 151 9 572 23 0 42 0 PLIN4,PLIN5,LRG1,SEMA6B
SE_02_001900297 chr19:4567219-4654356 Sample_02_0019 Embryo Neural crest cells 297 21 2609 127 1 91 760 TNFAIP8L1,PLIN4,PLIN5,LRG1,SEMA6B,C19ORF10
SE_02_036900403 chr19:4570052-4599406 Sample_02_0369 Skeletal muscle RD 403 4 890 36 0 59 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_037900403 chr19:4570052-4599406 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 403 4 890 36 0 59 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_037300408 chr19:4570169-4599688 Sample_02_0373 Skeletal muscle RMS206 408 6 892 36 0 59 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_037600052 chr19:4570899-4585003 Sample_02_0376 Skeletal muscle RMS237 52 6 419 19 0 38 0 PLIN5,LRG1,SEMA6B
SE_02_021601179 chr19:4571182-4587077 Sample_02_0216 Skin NHEK_scramble 1179 5 463 23 0 41 0 PLIN5,LRG1,SEMA6B
SE_02_021101184 chr19:4571310-4599061 Sample_02_0211 Lung MRC-5_NFD_1DPT 1184 9 835 36 0 58 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_133500244 chr19:4571532-4584907 Sample_02_1335 Lung NCI-H1299_wtSMARCA4_Dox 244 7 401 19 0 36 0 PLIN5,LRG1,SEMA6B
SE_02_133700116 chr19:4574258-4585125 Sample_02_1337 Lung NCI-H1299-wtSMARCA4_Dox_SAHA 116 8 291 13 0 39 0 PLIN5,LRG1,SEMA6B
SE_02_132200787 chr19:4574383-4584796 Sample_02_1322 Connective Tissue HT1080_WT 787 4 276 13 0 33 0 PLIN5,LRG1,SEMA6B
SE_02_055800536 chr19:4574401-4585100 Sample_02_0558 iPSCs FX52 iPSCs mock 536 4 286 13 0 39 0 PLIN5,LRG1,SEMA6B
SE_02_126800888 chr19:4574494-4584750 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 888 3 273 13 0 27 0 PLIN5,LRG1,SEMA6B
SE_02_026000480 chr19:4574522-4585183 Sample_02_0260 Lung NCI-H1299_EGFP-NEO_reporter_cells_SB939 480 4 284 14 0 40 0 PLIN5,LRG1,SEMA6B
SE_02_132001089 chr19:4574676-4585036 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1089 3 276 13 0 37 0 PLIN5,LRG1,SEMA6B
SE_02_093200519 chr19:4574818-4620661 Sample_02_0932 Embryo H9 WT_1 519 11 1407 75 0 64 0 TNFAIP8L1,MYDGF,LRG1,PLIN5,SEMA6B
SE_02_001500345 chr19:4574853-4588758 Sample_02_0015 Liver HepG2_shNS 345 4 380 18 0 40 0 PLIN5,LRG1,SEMA6B
SE_02_096200969 chr19:4580096-4610637 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 969 5 905 50 0 58 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_001400250 chr19:4580203-4585129 Sample_02_0014 Liver HepG2_shBRG1 250 3 116 11 0 33 0 PLIN5,LRG1,SEMA6B
SE_02_133600155 chr19:4580477-4584963 Sample_02_1336 Lung NCI-H1299_mutSMARCA4_Dox 155 3 104 10 0 30 0 PLIN5,LRG1,SEMA6B
SE_02_138400840 chr19:4580512-4610456 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 840 8 892 47 0 48 0 TNFAIP8L1,PLIN5,LRG1,SEMA6B
SE_02_133000626 chr19:4584084-4636910 Sample_02_1330 Blood AMU-AML1 626 15 1588 77 1 38 0 TNFAIP8L1,DPP9-AS1,MYDGF,LRG1,PLIN5,SEMA6B
Genomic distribution of SEs associated with PLIN5
Genome Browser

The strength of the tissue affected by the gene

Expression of PLIN5

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)