SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000115556
Gene: PLCD4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:218607855-218637184 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_023400935 chr2:218507511-218579354 Sample_02_0234 Tonsil Th17 935 11 1621 190 22 114 731 USP37,RQCD1,PLCD4
SE_02_104902134 chr2:218519878-218591680 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 2134 19 1606 190 18 134 878 RQCD1,USP37,PLCD4
SE_02_012500816 chr2:218554378-218571367 Sample_02_0125 Embryo Embryonic-stem-cells_Primed 816 2 412 50 6 79 384 USP37,RQCD1,PLCD4
SE_02_068500565 chr2:218557008-218570750 Sample_02_0685 Lung NCI-H1048_no infection 565 2 346 44 5 78 384 RQCD1,USP37,PLCD4
SE_02_093500705 chr2:218562876-218571807 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 705 4 259 31 3 64 281 RQCD1,USP37,PLCD4
SE_02_087901569 chr2:218564622-218583200 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1569 4 526 58 7 69 338 RQCD1,USP37,PLCD4
SE_01_002000741 chr2:218565878-218571786 Sample_01_0020 Blood B-cell 741 1 194 23 2 54 264 USP37,RQCD1,PLCD4
SE_02_017201380 chr2:218565944-218583793 Sample_02_0172 Lung IMR-90_quiescent 1380 3 499 56 7 70 338 USP37,RQCD1,PLCD4
SE_02_038200565 chr2:218565963-218579946 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 565 1 406 47 7 54 264 USP37,RQCD1,PLCD4
SE_02_038100703 chr2:218566024-218579939 Sample_02_0381 Heart purified cardiomyocyte WT 703 1 402 47 7 54 264 USP37,RQCD1,PLCD4
SE_00_000700380 chr2:218566089-218571577 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 380 1 177 22 2 54 264 USP37,RQCD1,PLCD4
SE_02_145400179 chr2:218566147-218582695 Sample_02_1454 Arter pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 179 4 470 56 7 60 303 RQCD1,USP37,PLCD4
SE_00_000800329 chr2:218566239-218571702 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 329 1 179 22 2 53 264 USP37,RQCD1,PLCD4
SE_02_145100150 chr2:218566297-218582649 Sample_02_1451 Arter pulmonary arterial smooth muscle cells_PAH1_sictrl 150 4 462 54 7 59 303 RQCD1,USP37,PLCD4
SE_02_017100916 chr2:218566385-218584324 Sample_02_0171 Lung IMR-90_proliferating 916 2 496 57 7 69 338 USP37,RQCD1,PLCD4
SE_02_145200245 chr2:218566843-218582691 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 245 4 448 52 7 54 303 RQCD1,USP37,PLCD4
SE_00_000301405 chr2:218566929-218571583 Sample_00_0003 Adrenal gland adrenal-gland_97d 1405 1 151 18 2 48 264 USP37,RQCD1,PLCD4
SE_00_004400540 chr2:218566964-218571523 Sample_00_0044 Cord blood T-cell 540 1 148 18 2 48 264 USP37,RQCD1,PLCD4
SE_00_000900309 chr2:218567040-218571727 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 309 1 154 18 2 47 264 USP37,RQCD1,PLCD4
SE_02_136500735 chr2:218567140-218571449 Sample_02_1365 Pancreas AsPC1-untreated 735 2 143 18 2 47 264 RQCD1,USP37,PLCD4
SE_00_002700406 chr2:218567209-218571544 Sample_00_0027 Blood natural-killer-cell 406 1 144 18 2 47 264 USP37,RQCD1,PLCD4
SE_02_145500247 chr2:218567295-218582724 Sample_02_1455 Arter pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 247 3 436 52 7 53 303 RQCD1,USP37,PLCD4
SE_00_004700262 chr2:218567306-218571166 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 262 1 129 18 2 47 264 RQCD1,USP37,PLCD4
SE_02_090401189 chr2:218567367-218579252 Sample_02_0904 Heart left ventricle_DCM_LV1028 1189 4 340 39 7 47 264 RQCD1,USP37,PLCD4
SE_02_143000461 chr2:218567379-218570652 Sample_02_1430 Blood Kasumi-3_mock-infected 461 1 114 17 2 46 264 RQCD1,USP37,PLCD4
SE_02_088001312 chr2:218567439-218582752 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 1312 3 431 50 7 53 303 RQCD1,USP37,PLCD4
SE_02_090201059 chr2:218567497-218578764 Sample_02_0902 Heart left ventricle_LV1558 1059 8 323 37 6 47 264 RQCD1,USP37,PLCD4
SE_02_113901160 chr2:218567509-218583717 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1160 2 448 50 7 63 338 RQCD1,USP37,PLCD4
SE_02_048500120 chr2:218567726-218570590 Sample_02_0485 Bone marrow HSCe_65y_CD34+,CD38-,Lineage- 120 1 101 15 2 46 264 RQCD1,USP37,PLCD4
SE_02_130900883 chr2:218567752-218571390 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 883 1 121 15 2 47 264 RQCD1,USP37,PLCD4,ZNF142,BCS1L,STK36,RNF25,CTDSP1
SE_02_074500652 chr2:218567798-218570660 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 652 1 100 15 2 46 264 RQCD1,USP37,PLCD4
SE_02_017500856 chr2:218568469-218571479 Sample_02_0175 Lung IMR-90_Etoposide 856 1 104 12 1 29 155 RQCD1,USP37,PLCD4
SE_01_009500798 chr2:218568475-218570621 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 798 1 80 12 1 26 152 RQCD1,PLCD4,USP37
SE_01_011700496 chr2:218568488-218582614 Sample_01_0117 Lung fibroblast of lung 496 4 397 45 6 33 186 RQCD1,PLCD4,USP37,SLC11A1,ZNF142,STK36,RNF25,CTDSP1
SE_02_074601179 chr2:218568515-218578514 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1179 3 289 33 5 27 145 RQCD1,PLCD4,USP37
SE_02_065001246 chr2:218568522-218570789 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 1246 1 84 12 1 27 143 RQCD1,PLCD4,USP37
SE_02_074700691 chr2:218568541-218580322 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 691 8 335 38 6 27 136 RQCD1,PLCD4,USP37
SE_02_064501827 chr2:218568544-218570996 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1827 1 89 12 1 27 136 RQCD1,PLCD4,USP37
SE_02_064601348 chr2:218568560-218570868 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 1348 1 85 10 1 27 130 RQCD1,PLCD4,USP37
SE_02_104902082 chr2:218642908-218670139 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 2082 18 678 72 5 273 2517 RNF25,BCS1L,ZNF142,PLCD4,STK36,TTLL4
Genomic distribution of SEs associated with PLCD4
Genome Browser

The strength of the tissue affected by the gene

Expression of PLCD4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)