SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000065154
Gene: OAT Gene type: protein_coding
Strand: - External links:
Genomic region: chr10:124397303-124418976 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104600072 chr10:124205661-124393314 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 72 87 5492 265 11 214 0 OAT
SE_02_042400102 chr10:124337186-124390336 Sample_02_0424 Colon SW620 102 5 1794 146 6 61 0 OAT
SE_02_012400530 chr10:124421729-124455589 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 530 6 966 51 1 115 474 NKX1-2,LHPP,OAT
SE_02_103600625 chr10:124426614-124479078 Sample_02_1036 Mammary gland HCC70_XY018 625 23 1580 130 3 158 632 LHPP,NKX1-2,OAT
SE_02_103500824 chr10:124428072-124467898 Sample_02_1035 Mammary gland HCC70_Vehicle 824 18 1167 82 3 125 632 LHPP,NKX1-2,OAT
SE_02_074900161 chr10:124437839-124464260 Sample_02_0749 Mammary gland HCC1599_GSI 161 7 784 62 3 118 632 LHPP,NKX1-2,OAT
SE_02_074800164 chr10:124438184-124464292 Sample_02_0748 Mammary gland HCC1599_WO 164 5 772 61 3 118 632 LHPP,NKX1-2,OAT
SE_02_101701708 chr10:124447456-124478568 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1708 9 994 95 2 124 568 LHPP,NKX1-2,OAT
SE_02_101600584 chr10:124448542-124479555 Sample_02_1016 Embryo H9_Mesendoderm_24h 584 7 987 100 2 124 334 LHPP,NKX1-2,OAT
SE_00_002400904 chr10:124448620-124460213 Sample_00_0024 Embryo mesendoderm 904 3 347 21 2 78 176 NKX1-2,LHPP,OAT
SE_02_003600421 chr10:124449541-124482301 Sample_02_0036 Embryo H7 421 11 1048 109 2 134 330 LHPP,NKX1-2,OAT
SE_00_001200450 chr10:124450651-124471317 Sample_00_0012 Embryo H1-hESC 450 4 674 68 2 72 158 LHPP,OAT,NKX1-2
SE_02_006700523 chr10:124450794-124478794 Sample_02_0067 Embryo AzH-G2/M 523 3 914 89 2 94 158 LHPP,OAT,NKX1-2
SE_02_157201149 chr10:124450902-124478116 Sample_02_1572 iPSCs FiPSC 1149 7 889 85 2 78 158 LHPP,OAT,NKX1-2
SE_02_067800217 chr10:124451746-124470923 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 217 5 633 67 2 61 158 LHPP,OAT,NKX1-2
SE_02_104601414 chr10:124455119-124497847 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1414 16 1468 163 3 131 448 LHPP,OAT,NKX1-2
SE_02_028600440 chr10:124463786-124488051 Sample_02_0286 Liver HuH7_IL-1alpha_1h 440 4 837 97 1 70 122 LHPP,OAT,NKX1-2
SE_02_039600200 chr10:124463911-124679897 Sample_02_0396 Skin NHEK-D 200 55 7229 763 31 421 2445 FAM53B,LHPP,OAT,NKX1-2
SE_02_104700004 chr10:124463930-124754362 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 4 149 9272 895 41 806 3338 LHPP,FAM53B-AS1,FAM53B,OAT,METTL10,FAM175B,NKX1-2
SE_02_104301466 chr10:124464006-124495699 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1466 11 1090 123 1 95 201 LHPP,OAT,NKX1-2
SE_02_047600479 chr10:124464131-124487622 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 479 12 807 97 1 70 122 LHPP,OAT,NKX1-2
SE_02_001700628 chr10:124468316-124482173 Sample_02_0017 Embryo H9_ESC 628 5 457 59 0 62 0 LHPP,OAT,NKX1-2
Genomic distribution of SEs associated with OAT
Genome Browser

The strength of the tissue affected by the gene

Expression of OAT

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)