Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000236859 |
| Gene: | NIFK-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr2:121649320-121728563 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_090700494 | chr2:121525508-121614070 |
Sample_02_0907 | Heart | left ventricle_DCM_LV1223 | 494 | 38 | 2400 | 204 | 2 | 69 | 394 | RNU4ATAC,CLASP1,NIFK-AS1 |
| SE_02_152200325 | chr2:121560730-121600570 |
Sample_02_1522 | Skin | A375 RTKi | 325 | 9 | 1072 | 101 | 1 | 29 | 0 | CLASP1,NIFK-AS1,RNU4ATAC |
| SE_02_074000406 | chr2:121562076-121606782 |
Sample_02_0740 | Muscle | RH3 | 406 | 10 | 1189 | 113 | 1 | 50 | 77 | CLASP1,NIFK-AS1,RNU4ATAC |
| SE_02_147800218 | chr2:121595088-121627741 |
Sample_02_1478 | Bone | EW-3 | 218 | 8 | 842 | 84 | 1 | 36 | 77 | CLASP1,NIFK-AS1 |
| SE_02_053000624 | chr2:121625616-121645966 |
Sample_02_0530 | Mammary gland | MCF10A | 624 | 11 | 556 | 56 | 2 | 20 | 0 | CLASP1,NIFK-AS1 |
| SE_02_151600673 | chr2:121626171-121648611 |
Sample_02_1516 | Non-transformed mammary epithelial | IMEC MYC | 673 | 6 | 602 | 61 | 2 | 29 | 0 | CLASP1,NIFK-AS1 |
| SE_02_094100414 | chr2:121626741-121637884 |
Sample_02_0941 | Brain | T98G | 414 | 6 | 296 | 31 | 1 | 11 | 0 | CLASP1,NIFK-AS1 |
| SE_02_057100515 | chr2:121632136-121642353 |
Sample_02_0571 | Brain | LN229_1mM_glucose_5mM_acetate | 515 | 5 | 272 | 31 | 1 | 14 | 0 | CLASP1,NIFK-AS1 |
| SE_02_057200344 | chr2:121632605-121645872 |
Sample_02_0572 | Brain | LN229_1_mM_glucose | 344 | 6 | 356 | 41 | 2 | 15 | 0 | CLASP1,NIFK-AS1 |
| SE_02_057000861 | chr2:121632675-121641637 |
Sample_02_0570 | Brain | LN229_10_mM_glucose | 861 | 5 | 239 | 28 | 1 | 12 | 0 | CLASP1,NIFK-AS1 |
| SE_02_077501443 | chr2:121677194-121740524 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 1443 | 22 | 1841 | 142 | 1 | 32 | 588 | NIFK-AS1,NIFK,TSN,CLASP1 |
| SE_02_082600926 | chr2:121687421-121730442 |
Sample_02_0826 | Stomach | gastric tumor | 926 | 15 | 1220 | 97 | 1 | 24 | 247 | NIFK-AS1,NIFK,TSN,CLASP1 |
| SE_02_103602508 | chr2:121692818-121734833 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 2508 | 17 | 1257 | 106 | 1 | 30 | 397 | NIFK-AS1,NIFK,TSN,CLASP1 |
| SE_02_076600799 | chr2:121693479-121736917 |
Sample_02_0766 | Ovary | PEO1 | 799 | 14 | 1290 | 105 | 1 | 31 | 520 | NIFK-AS1,NIFK,TSN,CLASP1 |
| SE_02_158200173 | chr2:121694581-121723614 |
Sample_02_1582 | Renal | OS-RC-2 | 173 | 9 | 834 | 67 | 1 | 20 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
| SE_02_158100236 | chr2:121694702-121723559 |
Sample_02_1581 | Renal | OS-LM1 | 236 | 10 | 828 | 67 | 1 | 20 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
| SE_02_077001337 | chr2:121694855-121734343 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 1337 | 15 | 1177 | 98 | 1 | 30 | 397 | NIFK-AS1,NIFK,TSN,CLASP1 |
| SE_02_098901719 | chr2:121694889-121719277 |
Sample_02_0989 | Kidney | kidney cortex_WT | 1719 | 8 | 714 | 49 | 1 | 20 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
| SE_02_126900859 | chr2:121694975-121723618 |
Sample_02_1269 | Bone | Im-GCT-4072_G34W-repair_WT_A4 | 859 | 6 | 828 | 67 | 1 | 20 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
| SE_02_105100674 | chr2:121697113-121710449 |
Sample_02_1051 | Esophagus | Eso26 | 674 | 5 | 417 | 28 | 1 | 18 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
| SE_02_046700257 | chr2:121697219-121707895 |
Sample_02_0467 | Kidney | 786-O_control | 257 | 4 | 332 | 20 | 1 | 18 | 61 | NIFK-AS1,TSN,NIFK,CLASP1 |
Genomic distribution of SEs associated with NIFK-AS1