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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000077150
Gene: NFKB2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr10:102394110-102402524 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_007600211 chr10:102229659-102348517 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 211 12 2452 192 5 487 1213 PITX3,GBF1,NFKB2,ELOVL3
SE_02_141300014 chr10:102229951-102350004 Sample_02_1413 Muscle RH4_sgBRG1 14 23 2470 194 5 484 1201 GBF1,PITX3,NFKB2,ELOVL3
SE_01_009400159 chr10:102230177-102348139 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 159 29 2435 191 4 484 1159 GBF1,PITX3,NFKB2,ELOVL3
SE_02_108000107 chr10:102258331-102347950 Sample_02_1080 Muscle JR1 shCtrl 107 36 1826 141 4 318 144 GBF1,NFKB2,PITX3,ELOVL3
SE_02_036400086 chr10:102260164-102353044 Sample_02_0364 Skeletal muscle CTR 86 13 1886 144 4 338 322 GBF1,NFKB2,ELOVL3,PITX3
SE_02_087600037 chr10:102261002-102347827 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 37 26 1766 139 4 299 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_108100074 chr10:102261021-102347929 Sample_02_1081 Muscle CTR shCtrl 74 31 1768 139 4 299 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_087700092 chr10:102262493-102347821 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 92 24 1730 136 4 297 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_076200959 chr10:102267360-102349196 Sample_02_0762 Podocyte podocyte_CTL 959 16 1656 132 4 242 58 GBF1,NFKB2,PITX3,ELOVL3
SE_02_074600568 chr10:102277986-102346605 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 568 19 1408 110 4 211 58 GBF1,PITX3,NFKB2
SE_02_103602238 chr10:102291870-102351084 Sample_02_1036 Mammary gland HCC70_XY018 2238 20 1241 97 2 150 59 GBF1,NFKB2
SE_02_074100205 chr10:102299172-102347725 Sample_02_0741 Muscle RH30 205 10 1044 82 2 144 58 GBF1,NFKB2
SE_02_093600603 chr10:102299732-102345214 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 603 7 987 77 2 124 58 GBF1,NFKB2
SE_02_093800692 chr10:102333890-102345229 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 692 3 236 15 0 37 58 GBF1,NFKB2
SE_02_103501444 chr10:102365674-102403294 Sample_02_1035 Mammary gland HCC70_Vehicle 1444 16 824 47 1 379 3704 PSD,GBF1,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_103601470 chr10:102366616-102403325 Sample_02_1036 Mammary gland HCC70_XY018 1470 16 812 46 1 376 3638 PSD,GBF1,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_122300711 chr10:102384514-102400355 Sample_02_1223 Bone marrow KMS28BM 711 5 340 25 0 161 1325 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_082601464 chr10:102384818-102400993 Sample_02_0826 Stomach gastric tumor 1464 5 359 25 0 175 1462 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_142700814 chr10:102384840-102400220 Sample_02_1427 Shoulder fibroblast_343 814 5 329 25 0 156 1293 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_01_010101220 chr10:102384875-102400097 Sample_01_0101 Pancreas pancreas_54y 1220 3 325 25 0 148 1264 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_122400573 chr10:102384937-102402684 Sample_02_1224 Bone marrow normal plasma cell 573 5 408 32 0 222 1866 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_093001542 chr10:102384956-102402868 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1542 9 411 32 0 224 1922 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B,C10orf95
SE_02_153000924 chr10:102390836-102401833 Sample_02_1530 Peripheral blood neutrophils_0BA0X 924 3 246 20 0 194 1649 NFKB2,RPARP-AS1,PSD,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_092900771 chr10:102391004-102401859 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 771 4 243 19 0 195 1654 NFKB2,RPARP-AS1,PSD,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_081600883 chr10:102391048-102400073 Sample_02_0816 Ovary Clear cell ovarian cancer 883 4 187 16 0 138 1257 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_065900491 chr10:102392562-102400374 Sample_02_0659 Lung H23 491 1 158 11 0 153 1330 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_103000176 chr10:102392859-102402908 Sample_02_1030 Colon DKO 176 1 233 16 0 216 1928 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_152901041 chr10:102392860-102402028 Sample_02_1529 Peripheral blood neutrophils_0BC75 1041 2 209 13 0 196 1693 NFKB2,RPARP-AS1,PSD,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_064500606 chr10:102393097-102402879 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 606 4 225 15 0 216 1926 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_092800536 chr10:102393184-102400011 Sample_02_0928 Peripheral blood neutrophils_Ecoli 536 3 136 8 0 138 1245 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_104901575 chr10:102393258-102397282 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1575 1 85 4 0 76 668 NFKB2,PSD,FBXL15,CUEDC2,MIR146B
SE_02_102900799 chr10:102393272-102403012 Sample_02_1029 Colon HCT116 799 1 226 15 0 217 1950 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_081901158 chr10:102393389-102400081 Sample_02_0819 Ovary Mucinous ovarian cancer 1158 2 134 8 0 138 1258 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_142500616 chr10:102393392-102400029 Sample_02_1425 Shoulder fibroblast_384 616 3 134 8 0 138 1252 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_122000289 chr10:102393408-102400017 Sample_02_1220 Bone marrow JJN3 289 3 134 8 0 138 1249 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_142600725 chr10:102393491-102399948 Sample_02_1426 Shoulder fibroblast_341 725 2 133 8 0 138 1230 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_059300071 chr10:102393495-102400074 Sample_02_0593 Fetal spleenocytes fetal naive T cells 71 3 132 8 0 138 1257 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_093800879 chr10:102393507-102399620 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 879 2 127 6 0 123 1174 NFKB2,PSD,FBXL15,CUEDC2,MIR146B
SE_02_064600332 chr10:102393527-102402670 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 332 3 214 15 0 214 1862 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_136500385 chr10:102393529-102400146 Sample_02_1365 Pancreas AsPC1-untreated 385 3 132 8 0 143 1272 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_135400815 chr10:102393536-102399714 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 815 2 128 6 0 137 1190 NFKB2,PSD,FBXL15,CUEDC2,MIR146B
SE_02_155600674 chr10:102393546-102407516 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 674 5 362 25 0 281 2653 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_147200676 chr10:102393548-102399964 Sample_02_1472 Fetal lung IMR-90 676 2 132 8 0 138 1231 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_125400510 chr10:102393564-102399601 Sample_02_1254 Bladder Bladder tumor Basal1 510 2 127 6 0 122 1171 NFKB2,PSD,FBXL15,CUEDC2,MIR146B
SE_02_135300691 chr10:102393568-102399607 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 691 2 127 6 0 123 1172 NFKB2,PSD,FBXL15,CUEDC2,MIR146B
SE_02_059100088 chr10:102393568-102400137 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 88 2 132 8 0 142 1272 NFKB2,RPARP-AS1,PSD,FBXL15,CUEDC2,MIR146B
SE_02_065000612 chr10:102393591-102402418 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 612 3 206 14 0 213 1794 NFKB2,RPARP-AS1,PSD,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_103900473 chr10:102397517-102422241 Sample_02_1039 Peripheral blood CD4+ CD7- cells_CTCL1043 473 6 608 31 1 489 4164 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_104901969 chr10:102397951-102404011 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1969 1 162 14 0 150 1395 PSD,NFKB2,RPARP-AS1,FBXL15,C10ORF95,CUEDC2,MIR146B
SE_02_110500438 chr10:102398428-102430482 Sample_02_1105 Brain NBL-S 438 11 766 38 1 524 4652 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_097400214 chr10:102398686-102423469 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 214 4 606 30 1 478 4170 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_096200259 chr10:102398704-102425942 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 259 7 666 36 1 518 4592 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_155400983 chr10:102398721-102423177 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 983 7 601 30 1 478 4108 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_108200265 chr10:102398774-102423148 Sample_02_1082 Retina retina 265 3 598 30 1 478 4085 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_068600279 chr10:102398942-102422138 Sample_02_0686 Lung NCI-H128_no infection 279 4 580 30 1 445 3849 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_068701128 chr10:102398981-102422597 Sample_02_0687 Lung NCI-H146_no infection 1128 4 588 30 1 459 3909 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_096600571 chr10:102399025-102425222 Sample_02_0966 Brain H3.3K27M_JN29-BS3 571 5 647 34 1 502 4463 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_054100210 chr10:102399030-102422166 Sample_02_0541 Brain Kelly_NaiveJQ1 210 4 579 30 1 447 3840 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_054300135 chr10:102399031-102422154 Sample_02_0543 Brain Kelly_vehicle 135 8 579 30 1 446 3838 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_155800283 chr10:102399057-102422172 Sample_02_1558 Gastrointestinal Stromal GIST-7_PDGFRA e18 283 6 579 30 1 448 3836 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_096900365 chr10:102399076-102425972 Sample_02_0969 Brain H3.3K27M_PL637 365 4 661 36 1 510 4504 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_123500427 chr10:102399197-102422359 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 427 8 578 29 1 459 3860 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_120501160 chr10:102399225-102423447 Sample_02_1205 Brain NB3 1160 9 596 29 1 470 4055 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_110600258 chr10:102399251-102430485 Sample_02_1106 Brain NGP 258 7 750 37 1 514 4481 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_110400358 chr10:102399256-102423015 Sample_02_1104 Brain NB-69 358 4 589 29 1 467 3959 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_096000416 chr10:102399317-102425817 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 416 5 654 35 1 505 4462 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_087400226 chr10:102400592-102422287 Sample_02_0874 Colon HCT116_siGLIS2.2-5FU 226 8 548 27 1 412 3525 PSD,FBXL15,NFKB2,RPARP-AS1,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_087200403 chr10:102402244-102425304 Sample_02_0872 Colon HCT116_siCtrl-5FU 403 6 559 27 1 419 3771 PSD,FBXL15,CUEDC2,NFKB2,RPARP-AS1,TMEM180,C10ORF95,MIR146B
SE_02_004700275 chr10:102406650-102423901 Sample_02_0047 Pancreatic endoderm IIDP/donor790 275 1 393 13 1 312 2662 CUEDC2,PSD,FBXL15,TMEM180,NFKB2,C10ORF95,MIR146B
SE_02_033900345 chr10:102408293-102423056 Sample_02_0339 Neuroblastoma NGP 345 2 327 10 1 285 2384 PSD,FBXL15,TMEM180,NFKB2,C10ORF95,CUEDC2,MIR146B
SE_02_108300599 chr10:102411301-102423294 Sample_02_1083 Macula macula 599 1 266 6 1 249 2036 PSD,FBXL15,CUEDC2,RPARP-AS1,NFKB2,TMEM180,C10ORF95,MIR146B
SE_02_077501616 chr10:102415301-102421736 Sample_02_0775 Pancreas EndoC-BH1_SE 1616 1 143 3 1 131 1121 PSD,FBXL15,RPARP-AS1,NFKB2,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_076500282 chr10:102417726-102424245 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 282 1 131 2 0 120 1258 PSD,FBXL15,CUEDC2,RPARP-AS1,NFKB2,TMEM180,C10ORF95,MIR146B
SE_02_066300706 chr10:102417785-102423645 Sample_02_0663 Thyroid TT 706 1 114 2 0 108 1112 PSD,FBXL15,CUEDC2,RPARP-AS1,NFKB2,TMEM180,C10ORF95,MIR146B
SE_02_003200616 chr10:102418006-102425436 Sample_02_0032 Pancreas pancreatic-islets-M 616 1 161 8 0 139 1508 CUEDC2,PSD,FBXL15,TMEM180,NFKB2,C10ORF95,MIR146B
SE_02_039601931 chr10:102418335-102424126 Sample_02_0396 Skin NHEK-D 1931 1 117 2 0 116 1232 CUEDC2,PSD,FBXL15,TMEM180,NFKB2,C10ORF95,MIR146B
SE_02_077400275 chr10:102418363-102422813 Sample_02_0774 Prostate 22Rv1_delSite1_Clone11/12-D8 275 1 92 2 0 96 951 PSD,FBXL15,RPARP-AS1,NFKB2,TMEM180,C10ORF95,CUEDC2,MIR146B
SE_02_001500724 chr10:102419940-102436303 Sample_02_0015 Liver HepG2_shNS 724 2 334 20 1 154 1269 CUEDC2,FBXL15,TMEM180,NFKB2,PSD,C10ORF95,MIR146B
SE_02_109500524 chr10:102420024-102437116 Sample_02_1095 Blood CD34 Erythroid cells_Don002 524 2 354 21 1 158 1330 FBXL15,CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD
SE_02_064502038 chr10:102420066-102422822 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 2038 1 60 2 0 49 570 FBXL15,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD,CUEDC2,MIR146B
SE_02_081601448 chr10:102420220-102436708 Sample_02_0816 Ovary Clear cell ovarian cancer 1448 2 335 20 1 158 1285 FBXL15,CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD
SE_02_083501192 chr10:102420368-102436900 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 1192 2 342 20 1 157 1254 FBXL15,CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD
SE_02_146000869 chr10:102420571-102442483 Sample_02_1460 Blood Mutz-3 869 5 474 35 1 159 1217 FBXL15,CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD
SE_02_133100825 chr10:102420613-102438742 Sample_02_1331 Blood Molm13_CTRL 825 3 382 24 1 159 1211 FBXL15,CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD
SE_02_103602814 chr10:102421131-102430122 Sample_02_1036 Mammary gland HCC70_XY018 2814 3 185 10 0 98 929 FBXL15,CUEDC2,RPARP-AS1,NFKB2,TMEM180,C10ORF95,PSD,MIR146B
SE_02_139000830 chr10:102431455-102437895 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 830 1 123 13 1 53 200 CUEDC2,MIR146B,RPARP-AS1,NFKB2,TMEM180,FBXL15,C10ORF95,PSD
SE_02_012400078 chr10:102437887-102469539 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 78 5 780 88 3 37 1376 TMEM180,C10ORF95,ACTR1A,FBXL15,NFKB2,PSD,SUFU,CUEDC2,MIR146B
Genomic distribution of SEs associated with NFKB2
Genome Browser

The strength of the tissue affected by the gene

Expression of NFKB2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)