SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000213920
Gene: MDP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr14:24213943-24216070 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103602246 chr14:24153637-24176324 Sample_02_1036 Mammary gland HCC70_XY018 2246 13 598 51 0 138 1892 REC8,IRF9,RNF31,DCAF11,IPO4,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_104800712 chr14:24155361-24184404 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 712 11 810 65 0 208 3333 IPO4,REC8,IRF9,RNF31,CHMP4A,DCAF11,FITM1,MIR7703,PSME2,TSSK4,TM9SF1,PSME1,MDP1,GMPR2,NEDD8,EMC9
SE_02_093001139 chr14:24157042-24167880 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1139 7 279 25 0 88 1300 IRF9,RNF31,REC8,DCAF11,IPO4,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703,TGM1,TINF2,LRRC16B,LTB4R2,RP11-468E2.6
SE_02_119500570 chr14:24157972-24182469 Sample_02_1195 Brain GBM29 570 10 687 60 0 149 2660 IPO4,REC8,IRF9,RNF31,DCAF11,NEDD8,GMPR2,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_117300697 chr14:24159478-24182677 Sample_02_1173 Brain GBM01 697 6 615 49 0 140 2637 IPO4,REC8,IRF9,RNF31,DCAF11,NEDD8,GMPR2,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_067200506 chr14:24159655-24181885 Sample_02_0672 Endometrium endometrium cancer_DSG 506 7 593 49 0 133 2457 IPO4,REC8,IRF9,RNF31,DCAF11,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_081800874 chr14:24160204-24182385 Sample_02_0818 Ovary High-grade serous ovarian cancer 874 5 593 49 0 132 2467 IPO4,REC8,IRF9,RNF31,DCAF11,NEDD8,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_061500870 chr14:24160370-24168316 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 870 3 171 13 0 58 922 IRF9,RNF31,REC8,DCAF11,IPO4,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,MDP1,PSME2,PSME1,MIR7703
SE_02_067400778 chr14:24162834-24181393 Sample_02_0674 Endometrium E1_FA 778 7 511 44 0 88 1887 IPO4,REC8,IRF9,DCAF11,CHMP4A,FITM1,TSSK4,TM9SF1,EMC9,RNF31,MDP1,PSME2,PSME1,MIR7703
SE_02_117401123 chr14:24165700-24182640 Sample_02_1174 Brain GBM02 1123 4 467 40 0 79 1744 IPO4,REC8,IRF9,TSSK4,EMC9,GMPR2,CHMP4A,RNF31,MDP1,TM9SF1,FITM1,NEDD8,PSME1,PSME2,MIR7703
SE_02_003200787 chr14:24176703-24185683 Sample_02_0032 Pancreas pancreatic-islets-M 787 1 298 17 0 97 1783 REC8,IPO4,PSME1,RNF31,FITM1,IRF9,GMPR2,NEDD8,MDP1,CHMP4A,TM9SF1,TSSK4,FAM158A,PSME2
SE_02_103600880 chr14:24191803-24203956 Sample_02_1036 Mammary gland HCC70_XY018 880 7 344 49 2 61 526 TM9SF1,REC8,TSSK4,IPO4,GMPR2,CHMP4A,MDP1,RNF31,IRF9,NEDD8,MIR7703,PSME2,TINF2
SE_02_072600312 chr14:24223796-24240580 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 312 7 419 29 1 73 1305 GMPR2,NEDD8-MDP1,NEDD8,TINF2,TSSK4,CHMP4A,MDP1,IPO4,TM9SF1,TGM1,RABGGTA
SE_02_153000420 chr14:24230206-24246396 Sample_02_1530 Peripheral blood neutrophils_0BA0X 420 1 382 19 1 85 1473 GMPR2,NEDD8-MDP1,NEDD8,TINF2,TSSK4,CHMP4A,MDP1,IPO4,TM9SF1,TGM1,RABGGTA
SE_02_149200288 chr14:24230832-24244187 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 288 1 317 15 1 85 1473 GMPR2,NEDD8-MDP1,NEDD8,TINF2,TSSK4,CHMP4A,MDP1,IPO4,TM9SF1,TGM1,RABGGTA
SE_02_087500425 chr14:24230846-24244096 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 425 1 314 15 1 85 1473 GMPR2,NEDD8-MDP1,NEDD8,TINF2,TSSK4,CHMP4A,MDP1,IPO4,TM9SF1,TGM1,RABGGTA
SE_02_093001089 chr14:24237976-24252378 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1089 8 359 17 2 71 932 GMPR2,TGM1,TINF2,TSSK4,DHRS1,CHMP4A,MDP1,IPO4,TM9SF1,RABGGTA,NEDD8,NOP9
SE_02_088601518 chr14:24237997-24246070 Sample_02_0886 Skin foreskin_ p63KLF4 1518 1 200 7 1 36 770 GMPR2,TINF2,TSSK4,CHMP4A,MDP1,IPO4,TM9SF1,TGM1,RABGGTA,NEDD8
SE_02_003200936 chr14:24239822-24243962 Sample_02_0032 Pancreas pancreatic-islets-M 936 1 103 2 1 18 536 TINF2,TGM1,NEDD8,CHMP4A,TM9SF1,RABGGTA,GMPR2,MDP1,TSSK4
SE_02_081601433 chr14:24240158-24247483 Sample_02_0816 Ovary Clear cell ovarian cancer 1433 2 182 9 0 13 480 TINF2,TSSK4,CHMP4A,GMPR2,MDP1,TM9SF1,TGM1,RABGGTA,NEDD8
SE_02_103200380 chr14:24246100-24297535 Sample_02_1032 Head and neck SCC1 JQ1 380 13 1452 147 6 302 3472 DHRS1,TGM1,RABGGTA,TSSK4,LTB4R,LTB4R2,MDP1,GMPR2,CHMP4A,RIPK3,CIDEB,NOP9,NEDD8,TINF2,ADCY4
SE_02_081700893 chr14:24246528-24281649 Sample_02_0817 Ovary Epithelial ovarian cancer 893 7 1034 84 2 270 2741 TGM1,RABGGTA,TSSK4,NEDD8,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,LTB4R,CIDEB,NOP9,TINF2
SE_02_021600140 chr14:24249284-24282833 Sample_02_0216 Skin NHEK_scramble 140 13 1008 83 3 267 2673 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB,TSSK4
SE_02_048000995 chr14:24252818-24297690 Sample_02_0480 Gingival epithelial HGEP 995 8 1277 134 5 266 3310 DHRS1,TGM1,RABGGTA,TSSK4,LTB4R,LTB4R2,MDP1,GMPR2,CHMP4A,RIPK3,CIDEB,NOP9,NEDD8,TINF2,ADCY4,REC8,NFATC4,PSME1,PSME2,EMC9,IPO4,NYNRIN,DCAF11
SE_02_081800697 chr14:24256126-24268926 Sample_02_0818 Ovary High-grade serous ovarian cancer 697 1 401 38 1 129 1580 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_010500606 chr14:24256332-24266944 Sample_02_0105 Skin neonatal_keratinocytes 606 1 343 31 1 103 1219 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_02_088601587 chr14:24256597-24265994 Sample_02_0886 Skin foreskin_ p63KLF4 1587 1 303 24 1 90 1070 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_135800381 chr14:24257557-24279696 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 381 8 679 63 1 175 2119 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_039600854 chr14:24257913-24266147 Sample_02_0396 Skin NHEK-D 854 1 282 23 1 89 1070 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_02_072600071 chr14:24258180-24279613 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 71 10 661 62 1 174 2105 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_022700114 chr14:24258254-24266105 Sample_02_0227 Oesophagus TE7 114 3 269 22 1 88 1033 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_03_000300125 chr14:24258272-24281309 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 125 4 712 63 1 188 2082 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_02_094500168 chr14:24258272-24285756 Sample_02_0945 Brain SF767 168 5 814 74 2 190 2082 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,ADCY4,NOP9,TINF2,NEDD8
SE_02_135900621 chr14:24258384-24279291 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 621 6 641 62 1 157 2055 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_050700142 chr14:24258501-24266362 Sample_02_0507 Esophagus TE7_1 142 3 276 24 1 84 998 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_066600449 chr14:24258502-24275194 Sample_02_0666 Prostate RWPE1 Lacz rep1 449 3 537 56 1 157 2022 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_072500047 chr14:24258585-24296916 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 47 15 1094 125 5 214 2720 DHRS1,TGM1,RABGGTA,LTB4R,LTB4R2,MDP1,GMPR2,CHMP4A,RIPK3,CIDEB,ADCY4,NOP9,TINF2,NEDD8
SE_02_135700502 chr14:24258628-24275717 Sample_02_1357 Other IC8-deltaEGF-L1596H_GSI_0h 502 5 544 58 1 156 2001 TGM1,RABGGTA,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,NOP9,TINF2,NEDD8
SE_02_060000529 chr14:24258666-24296892 Sample_02_0600 Mammary gland MCF10A_p53shRNA_DMSO 529 11 1091 125 5 213 2702 DHRS1,TGM1,RABGGTA,LTB4R,LTB4R2,MDP1,GMPR2,CHMP4A,RIPK3,CIDEB,ADCY4,NOP9,TINF2,NEDD8
SE_02_009700423 chr14:24258694-24279963 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 423 5 656 62 1 168 1983 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_02_026600041 chr14:24259056-24285452 Sample_02_0266 Bronchial HBE_Primary human bronchial epithelial cells_ 41 5 783 73 2 177 1903 RABGGTA,TGM1,LTB4R,TINF2,CHMP4A,ADCY4,GMPR2,C14ORF21,NEDD8,LTB4R2,MDP1,DHRS1,CIDEB
SE_00_005300862 chr14:24262188-24265385 Sample_00_0053 Embryo trophoblast cell originated from H1 862 1 99 13 1 9 198 TGM1,LTB4R,LTB4R2,DHRS1,MDP1,GMPR2,CHMP4A,CIDEB,RABGGTA,NOP9,TINF2,NEDD8
Genomic distribution of SEs associated with MDP1
Genome Browser

The strength of the tissue affected by the gene

Expression of MDP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)