SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: LOC101930452 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104301406 chr12:9285704-9350686 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1406 14 1884 269 5 102 2392 LOC642846,LINC00987,LOC101928030,LOC101930452
SE_02_104601491 chr12:9285711-9335488 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1491 20 1426 206 4 102 2155 LOC642846,LINC00987,LOC101928030,LOC101930452,DDX12P
SE_02_104701557 chr12:9285714-9336283 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1557 24 1451 212 4 102 2271 LOC642846,LINC00987,LOC101928030,LOC101930452
SE_02_104800649 chr12:9285715-9331940 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 649 19 1315 197 4 102 2115 LOC642846,LINC00987,LOC101928030,LOC101930452
SE_02_107800085 chr12:9285759-9343895 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 85 18 1680 241 5 102 2342 LOC642846,LINC00987,LOC101928030,LOC101930452
SE_02_149301082 chr12:9306313-9318959 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 1082 3 426 52 1 57 803 LOC642846,LOC101930452
SE_02_074000803 chr12:9307796-9343934 Sample_02_0740 Muscle RH3 803 16 1223 189 4 48 959 LOC642846,LOC101928030,LOC101930452
SE_02_057100138 chr12:9331460-9366820 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 138 17 1085 140 1 0 277 LOC642846,LOC101928030,LOC101930452
SE_02_057000122 chr12:9332001-9367315 Sample_02_0570 Brain LN229_10_mM_glucose 122 15 1077 138 1 0 277 LOC642846,LOC101928030,LOC101930452
SE_02_094200121 chr12:9332934-9351650 Sample_02_0942 Brain LN229 121 7 573 71 1 0 277 LOC642846,LOC101928030,LOC101930452
SE_02_104700763 chr12:9403043-9450812 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 763 26 1751 235 0 96 2462 DDX12P,LOC101928030,LOC101930452
SE_02_104301313 chr12:9403183-9446162 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1313 16 1492 202 0 96 2343 DDX12P,LOC101928030,LOC101930452
SE_02_104901672 chr12:9403249-9450839 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1672 14 1729 235 0 96 2462 DDX12P,LOC101928030,LOC101930452
SE_02_118900212 chr12:9403262-9419171 Sample_02_1189 Brain GBM22 212 7 778 115 0 5 337 DDX12P,LOC101928030,LOC101930452
SE_02_104800748 chr12:9403267-9444465 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 748 16 1451 200 0 96 2293 DDX12P,LOC101928030,LOC101930452
SE_02_077900262 chr12:9403337-9451328 Sample_02_0779 Lymphoma U2932 262 15 1726 239 0 96 2462 DDX12P,LOC101928030,LOC101930452
SE_02_096000530 chr12:9403753-9416928 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 530 8 671 103 0 0 0 DDX12P,LOC101928030,LOC101930452
SE_02_104601430 chr12:9412971-9469348 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1430 21 1654 291 0 96 2462 DDX12P,LOC101928030,LOC101930452
Genomic distribution of SEs associated with LOC101930452
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC101930452

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)