SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: LOC100507462 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_068701200 chr6:138800850-138822482 Sample_02_0687 Lung NCI-H146_no infection 1200 5 574 79 3 38 113 ECT2L,CCDC28A,LOC100507462
SE_02_069300175 chr6:138801383-138844852 Sample_02_0693 Lung NCI-H69_no infection 175 13 1203 157 4 90 268 ECT2L,CCDC28A,LOC100507462
SE_02_071200264 chr6:138812959-138825824 Sample_02_0712 Pancreas BxPC3_sgNEG 264 4 362 48 2 26 74 ECT2L,CCDC28A,LOC100507462
SE_02_070900918 chr6:138813308-138820226 Sample_02_0709 Pancreas hT85_organoid 918 5 190 26 1 23 53 ECT2L,CCDC28A,LOC100507462
SE_02_070700213 chr6:138813419-138825459 Sample_02_0707 Pancreas BxPC3 WT 213 8 339 45 2 24 46 ECT2L,CCDC28A,LOC100507462
SE_02_136600331 chr6:138813432-138825646 Sample_02_1366 Pancreas BxPC3-untreated 331 6 345 45 2 24 46 ECT2L,CCDC28A,LOC100507462
SE_02_129200619 chr6:138813441-138819249 Sample_02_1292 Lung JHU-LX110-SCLC PDX 619 7 153 15 1 21 46 ECT2L,CCDC28A,LOC100507462
SE_02_071300717 chr6:138813442-138825575 Sample_02_0713 Pancreas BxPC3_sgTP63 717 7 341 45 2 24 46 ECT2L,CCDC28A,LOC100507462
Genomic distribution of SEs associated with LOC100507462
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC100507462

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)