SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000253138
Gene: LINC00967 Gene type: lncRNA
Strand: + External links:
Genomic region: chr8:66192093-66197315 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_074700259 chr8:66100753-66173535 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 259 45 1938 164 11 170 836 TRIM55,LINC00967,CRH
SE_02_092300258 chr8:66112012-66177482 Sample_02_0923 Heart fetal heart_PCW10_12522 258 14 1731 137 11 202 1105 CRH,TRIM55,LINC00967
SE_02_045300175 chr8:66112088-66158110 Sample_02_0453 Neuroblastoma SJNB3 175 6 1256 108 10 137 836 TRIM55,LINC00967,CRH
SE_02_092400206 chr8:66112172-66177041 Sample_02_0924 Heart fetal heart_PCW10_12569 206 27 1717 136 11 194 1003 CRH,TRIM55,LINC00967
SE_02_076200245 chr8:66112175-66176828 Sample_02_0762 Podocyte podocyte_CTL 245 10 1710 136 11 187 973 CRH,TRIM55,LINC00967
SE_01_009400613 chr8:66112202-66159777 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 613 7 1285 110 10 137 836 TRIM55,LINC00967,CRH
SE_02_092200227 chr8:66112217-66177628 Sample_02_0922 Heart fetal heart_PCW10_12434 227 21 1732 137 11 203 1134 CRH,TRIM55,LINC00967
SE_02_074000393 chr8:66112286-66159855 Sample_02_0740 Muscle RH3 393 12 1286 110 10 137 836 TRIM55,LINC00967,CRH
SE_02_091200670 chr8:66112288-66173932 Sample_02_0912 Heart left ventricle_DCM_LV1300 670 16 1641 134 11 155 836 TRIM55,LINC00967,CRH
SE_02_089300980 chr8:66112306-66143615 Sample_02_0893 Heart left ventricle_LV1226 980 10 857 77 3 79 521 TRIM55,LINC00967,CRH
SE_02_092500314 chr8:66112336-66176922 Sample_02_0925 Heart fetal heart_PCW17_12570 314 15 1712 136 11 189 978 CRH,TRIM55,LINC00967
SE_02_074500049 chr8:66112340-66145106 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 49 8 896 81 3 80 521 TRIM55,LINC00967,CRH
SE_02_044300204 chr8:66112343-66177614 Sample_02_0443 Bone MG63 204 33 1730 137 11 203 1130 CRH,TRIM55,LINC00967
SE_02_089800896 chr8:66112348-66143623 Sample_02_0898 Heart left ventricle_LV1356 896 15 856 77 3 79 521 TRIM55,LINC00967,CRH
SE_02_090400663 chr8:66112349-66173534 Sample_02_0904 Heart left ventricle_DCM_LV1028 663 16 1631 133 11 155 836 TRIM55,LINC00967,CRH
SE_02_090700477 chr8:66112350-66173904 Sample_02_0907 Heart left ventricle_DCM_LV1223 477 22 1640 134 11 155 836 TRIM55,LINC00967,CRH
SE_02_090100522 chr8:66112376-66168279 Sample_02_0901 Heart left ventricle_LV1471 522 21 1487 120 10 147 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_072700054 chr8:66112380-66177794 Sample_02_0727 Fetal lung IMR90_Etoposide 54 13 1732 138 11 204 1151 CRH,TRIM55,LINC00967
SE_02_141300585 chr8:66112389-66173896 Sample_02_1413 Muscle RH4_sgBRG1 585 17 1638 134 11 155 836 TRIM55,LINC00967,CRH
SE_02_074600066 chr8:66112391-66174786 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 66 33 1661 135 11 162 890 TRIM55,LINC00967,CRH
SE_02_092100223 chr8:66112407-66177561 Sample_02_0921 Heart embryonic heart_CS22 223 32 1724 137 11 202 1121 CRH,TRIM55,LINC00967
SE_02_060600057 chr8:66112426-66176968 Sample_02_0606 Skin Skin Fibroblast_Nutlin3A 57 17 1709 136 11 189 982 CRH,TRIM55,LINC00967
SE_02_089100658 chr8:66112438-66168135 Sample_02_0891 Heart left ventricle_LV1202 658 18 1484 120 10 147 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_090300537 chr8:66112451-66174108 Sample_02_0903 Heart left ventricle_DCM_LV1009 537 19 1641 134 11 155 836 TRIM55,LINC00967,CRH
SE_02_089200851 chr8:66112460-66165986 Sample_02_0892 Heart left ventricle_LV1215 851 13 1430 117 10 143 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_050000073 chr8:66112465-66176952 Sample_02_0500 Fetal lung IMR90_#2 73 27 1709 136 11 189 981 CRH,TRIM55,LINC00967
SE_02_091300581 chr8:66112466-66174511 Sample_02_0913 Heart left ventricle_DCM_LV1304 581 23 1651 135 11 156 853 TRIM55,LINC00967,CRH
SE_02_088900934 chr8:66112467-66166140 Sample_02_0889 Heart left ventricle_LV1183 934 14 1435 117 10 143 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_088700975 chr8:66112470-66157941 Sample_02_0887 Heart left ventricle_LV1121 975 17 1238 108 10 137 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_090800915 chr8:66112470-66173462 Sample_02_0908 Heart left ventricle_DCM_LV1262 915 24 1627 133 11 155 836 TRIM55,LINC00967,CRH
SE_02_089601248 chr8:66112482-66143479 Sample_02_0896 Heart left ventricle_LV1294 1248 9 849 77 3 79 521 TRIM55,LINC00967,CRH
SE_02_090201131 chr8:66112508-66143448 Sample_02_0902 Heart left ventricle_LV1558 1131 7 846 77 3 79 521 TRIM55,LINC00967,CRH
SE_02_084000180 chr8:66112513-66176727 Sample_02_0840 Embryo hNPCs_R1159Q/+ 180 17 1699 136 11 172 963 CRH,TRIM55,LINC00967
SE_02_063600326 chr8:66112513-66176869 Sample_02_0636 Skin BJ5ta 326 15 1706 136 11 187 973 CRH,TRIM55,LINC00967
SE_02_088801030 chr8:66112523-66143701 Sample_02_0888 Heart left ventricle_LV1160 1030 15 853 77 3 79 521 TRIM55,LINC00967,CRH
SE_02_091900730 chr8:66112536-66165774 Sample_02_0919 Heart left ventricle_DCM_LV1532 730 12 1418 116 10 142 836 TRIM55,LINC00967,CRH
SE_02_155200403 chr8:66112543-66176850 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 403 19 1704 136 11 187 973 CRH,TRIM55,LINC00967
SE_02_089400487 chr8:66112544-66166012 Sample_02_0894 Heart left ventricle_LV1248 487 10 1428 117 10 143 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_090600821 chr8:66112545-66159631 Sample_02_0906 Heart left ventricle_DCM_LV1072 821 15 1273 109 10 137 836 TRIM55,LINC00967,CRH
SE_02_090500505 chr8:66112548-66174097 Sample_02_0905 Heart left ventricle_DCM_LV1033 505 21 1637 134 11 155 836 TRIM55,LINC00967,CRH
SE_00_005200650 chr8:66112567-66168254 Sample_00_0052 Heart left ventricle 3y 650 20 1482 119 10 147 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_060500213 chr8:66112576-66176902 Sample_02_0605 Skin Skin Fibroblast_DMSO 213 15 1704 135 11 187 975 CRH,TRIM55,LINC00967
SE_00_005501273 chr8:66112577-66142898 Sample_00_0055 Spleen spleen 34y 1273 5 831 75 3 79 521 TRIM55,LINC00967,CRH,PDE7A
SE_02_089000819 chr8:66112578-66158346 Sample_02_0890 Heart left ventricle_LV1200 819 12 1245 107 10 137 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_091000630 chr8:66112578-66174352 Sample_02_0910 Heart left ventricle_DCM_LV1275 630 27 1641 134 11 155 837 TRIM55,LINC00967,CRH
SE_02_091100405 chr8:66112584-66174319 Sample_02_0911 Heart left ventricle_DCM_LV1290 405 30 1640 134 11 155 837 TRIM55,LINC00967,CRH
SE_02_090001106 chr8:66112595-66159567 Sample_02_0900 Heart left ventricle_LV1452 1106 11 1271 108 10 137 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_157100665 chr8:66112596-66159348 Sample_02_1571 Fibroblast Fibroblast cells 665 13 1267 107 10 137 836 TRIM55,LINC00967,CRH
SE_02_089700700 chr8:66112599-66173791 Sample_02_0897 Heart left ventricle_LV1325 700 22 1633 133 11 155 836 TRIM55,LINC00967,CRH,DNAJC5B
SE_02_090900520 chr8:66112599-66173860 Sample_02_0909 Heart left ventricle_DCM_LV1264 520 16 1633 133 11 155 836 TRIM55,LINC00967,CRH
SE_01_011500352 chr8:66112601-66143506 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 352 12 845 75 3 79 521 TRIM55,LINC00967,CRH
SE_02_158300328 chr8:66112615-66168859 Sample_02_1583 Fetal lung IMR90_empty_GM 328 18 1493 118 10 152 836 TRIM55,LINC00967,CRH
SE_02_091700673 chr8:66112621-66158615 Sample_02_0917 Heart left ventricle_DCM_LV1433 673 13 1247 106 10 137 836 TRIM55,LINC00967,CRH
SE_00_004600980 chr8:66112637-66143381 Sample_00_0046 Heart right ventricle_34y 980 6 842 75 3 79 521 TRIM55,LINC00967,CRH
SE_00_005700641 chr8:66112646-66142539 Sample_00_0057 Heart right ventricle 3y 641 7 825 74 3 79 521 TRIM55,LINC00967,CRH
SE_02_108000699 chr8:66112660-66142916 Sample_02_1080 Muscle JR1 shCtrl 699 9 827 74 3 79 521 TRIM55,LINC00967,CRH
SE_02_083900199 chr8:66112679-66159994 Sample_02_0839 Embryo hNPCs_K755R/+ 199 10 1278 108 10 137 836 TRIM55,LINC00967,CRH
SE_02_086900762 chr8:66112787-66158258 Sample_02_0869 Fibroblast VH10_NO_UV 762 14 1236 106 10 137 836 TRIM55,LINC00967,CRH
SE_02_154900183 chr8:66113481-66142862 Sample_02_1549 Gastrointestinal Stromal GIST-430B 183 13 793 70 3 79 481 TRIM55,LINC00967,CRH
SE_02_049900680 chr8:66153918-66177606 Sample_02_0499 Fetal lung IMR90 IR Senescence 680 9 597 41 6 107 422 CRH,TRIM55,LINC00967
SE_02_049400938 chr8:66168331-66178694 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 938 4 275 18 1 78 381 CRH,TRIM55,LINC00967
SE_02_049500722 chr8:66168655-66182784 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 722 6 362 28 2 91 395 CRH,TRIM55,LINC00967
Genomic distribution of SEs associated with LINC00967
Genome Browser

The strength of the tissue affected by the gene

Expression of LINC00967

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)