SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000182329
Gene: KIAA2012 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:202073255-202205188 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_101500047 chr2:201910480-202040211 Sample_02_1015 Embryo H9_ Undifferentiated 47 31 3430 134 15 644 680 FZD7,KIAA2012,AC079354.1
SE_02_110400095 chr2:201964623-202039695 Sample_02_1104 Brain NB-69 95 18 2004 110 12 460 680 FZD7,KIAA2012
SE_02_156000882 chr2:201996700-202040187 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 882 7 1039 78 5 360 680 FZD7,KIAA2012
SE_02_155900632 chr2:201996834-202039594 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 632 8 1024 78 5 349 680 FZD7,KIAA2012
SE_02_074300038 chr2:202005450-202050025 Sample_02_0743 Embryo ES derived mesoderm_day2 38 17 1042 94 4 336 680 FZD7,KIAA2012
SE_02_090401233 chr2:202008469-202040867 Sample_02_0904 Heart left ventricle_DCM_LV1028 1233 9 749 61 4 293 680 FZD7,KIAA2012
SE_02_154400458 chr2:202008593-202040933 Sample_02_1544 Gastrointestinal Stromal GIST-882 458 6 745 61 4 293 680 FZD7,KIAA2012
SE_02_075500194 chr2:202014306-202040879 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 194 7 603 45 1 271 680 FZD7,KIAA2012
SE_02_093200507 chr2:202014610-202037682 Sample_02_0932 Embryo H9 WT_1 507 4 531 34 1 231 607 FZD7,KIAA2012
SE_02_093100281 chr2:202014762-202037744 Sample_02_0931 Embryo H9 UTXKO 281 4 526 34 1 228 611 FZD7,KIAA2012
SE_02_075700298 chr2:202015258-202049887 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 298 8 788 70 1 275 680 FZD7,KIAA2012
SE_02_101700456 chr2:202016695-202067381 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 456 8 1171 115 1 325 680 FZD7,KIAA2012,SUMO1,AC079354.1
SE_02_075200136 chr2:202018728-202040857 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 136 4 464 37 0 240 680 FZD7,KIAA2012
SE_02_063300294 chr2:202019215-202071403 Sample_02_0633 Gastrointestinal Stromal GIST-48B_Imatinib 294 13 1217 115 1 344 680 FZD7,KIAA2012
SE_02_101600478 chr2:202019481-202040217 Sample_02_1016 Embryo H9_Mesendoderm_24h 478 6 435 32 0 228 680 FZD7,KIAA2012
SE_02_068100065 chr2:202019591-202037234 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 65 8 374 23 0 186 571 FZD7,KIAA2012
SE_02_086000165 chr2:202019638-202040050 Sample_02_0860 iPSCs SAH_SMARCB1_K364del/+ 165 8 426 31 0 228 680 FZD7,KIAA2012
SE_02_068000036 chr2:202019644-202039753 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 36 11 421 31 0 225 680 FZD7,KIAA2012
SE_02_075600999 chr2:202019659-202040398 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 999 7 437 34 0 230 680 FZD7,KIAA2012
SE_02_074400131 chr2:202019793-202040021 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 131 7 422 30 0 228 680 FZD7,KIAA2012
SE_02_156700451 chr2:202019982-202064277 Sample_02_1567 iPSCs CiPSC 451 6 1006 100 1 295 680 FZD7,KIAA2012
SE_02_157200481 chr2:202020126-202052268 Sample_02_1572 iPSCs FiPSC 481 6 704 65 0 278 680 FZD7,KIAA2012
SE_02_067900145 chr2:202020234-202037243 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 145 5 362 22 0 181 571 FZD7,KIAA2012
SE_02_055800362 chr2:202020285-202036931 Sample_02_0558 iPSCs FX52 iPSCs mock 362 4 354 21 0 174 529 FZD7,KIAA2012
SE_02_055900594 chr2:202022639-202033604 Sample_02_0559 iPSCs FX52 iPSCs dC-T 594 2 221 14 0 71 0 FZD7,KIAA2012
SE_01_009500053 chr2:202022639-202065079 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 53 7 959 98 1 302 680 FZD7,KIAA2012
SE_02_055500648 chr2:202022677-202039885 Sample_02_0555 Other HAP1_WT 648 6 347 27 0 221 680 FZD7,KIAA2012
SE_02_056000411 chr2:202022779-202033503 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 411 3 216 14 0 66 0 FZD7,KIAA2012
SE_02_097600265 chr2:202022801-202037819 Sample_02_0976 Brain H3.3K27M-KO_DIPGXIII-c5p5-Rx_R1_cells_h3k27ac 265 4 304 20 0 195 625 FZD7,KIAA2012
SE_02_098400235 chr2:202022801-202037819 Sample_02_0984 Brain H3.3K27M-KO_DIPGXIII-C5P5 235 3 304 20 0 195 625 FZD7,KIAA2012
SE_02_157000555 chr2:202022848-202052333 Sample_02_1570 iPSCs EiPSC 555 6 634 64 0 275 680 FZD7,KIAA2012
SE_02_117200224 chr2:202022874-202036874 Sample_02_1172 Embryo H9 WT 224 2 283 18 0 167 517 FZD7,KIAA2012
SE_02_067800313 chr2:202022887-202033560 Sample_02_0678 Embryo H1 hESC-derived neural progenitor cells_Smad_12hr 313 3 214 14 0 66 0 FZD7,KIAA2012
SE_02_108400182 chr2:202022905-202039952 Sample_02_1084 Blood KBM7-derived near haploid cells 182 6 342 27 0 221 680 FZD7,KIAA2012
SE_02_067600168 chr2:202022941-202039509 Sample_02_0676 Embryo H1 hESC-derived neural progenitor cells_Smad_3hr 168 5 334 27 0 216 680 FZD7,KIAA2012
SE_02_075400506 chr2:202022989-202049865 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 506 6 578 57 0 245 680 FZD7,KIAA2012
SE_02_067700189 chr2:202023000-202039597 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 189 5 336 27 0 215 680 FZD7,KIAA2012
SE_02_074200145 chr2:202023031-202039552 Sample_02_0742 Embryo ESCs_day0 145 5 335 27 0 214 680 FZD7,KIAA2012
SE_02_086100252 chr2:202023089-202039944 Sample_02_0861 iPSCs SAH_WT 252 7 339 27 0 217 680 FZD7,KIAA2012
SE_02_075300499 chr2:202023102-202040129 Sample_02_0753 Embryo ES-derived progenitors_FG type 499 6 343 27 0 217 680 FZD7,KIAA2012
SE_00_004800210 chr2:202023200-202037148 Sample_00_0048 Embryo neuronal stem cell originated from H1 210 5 285 18 0 172 565 FZD7,KIAA2012
SE_02_086701311 chr2:202029849-202042451 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1311 6 260 29 0 201 680 FZD7,KIAA2012
SE_02_085800726 chr2:202030022-202046171 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 726 4 334 34 0 213 680 FZD7,KIAA2012
SE_02_044100165 chr2:202030130-202043666 Sample_02_0441 Bone M112 165 7 282 30 0 209 680 FZD7,KIAA2012
SE_02_126400926 chr2:202030232-202052278 Sample_02_1264 Bone Im-GCT-4072_G34W KO 926 3 487 57 0 243 680 FZD7,KIAA2012
SE_02_072701246 chr2:202030325-202042676 Sample_02_0727 Fetal lung IMR90_Etoposide 1246 5 254 27 0 202 680 FZD7,KIAA2012
SE_02_043900356 chr2:202030616-202042608 Sample_02_0439 Bone Hu09 356 7 248 25 0 200 680 FZD7,KIAA2012
SE_02_049901547 chr2:202030932-202040987 Sample_02_0499 Fetal lung IMR90 IR Senescence 1547 5 203 22 0 194 680 FZD7,KIAA2012
SE_02_056900882 chr2:202030987-202065509 Sample_02_0569 Periodontal ligament mesenchymal stem cell 882 8 807 91 1 264 680 FZD7,KIAA2012
SE_02_049400591 chr2:202031364-202039781 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 591 4 171 19 0 176 680 FZD7,KIAA2012
SE_02_083901270 chr2:202031578-202039195 Sample_02_0839 Embryo hNPCs_K755R/+ 1270 3 157 15 0 169 680 FZD7,KIAA2012
SE_02_061400414 chr2:202031686-202069596 Sample_02_0614 Liposarcoma MLPS_T2 414 12 898 98 1 289 680 FZD7,KIAA2012
SE_02_083800196 chr2:202031707-202037745 Sample_02_0838 Embryo hNPCs_WT 196 3 125 11 0 148 611 FZD7,KIAA2012
SE_02_049300402 chr2:202031722-202040852 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 402 4 188 21 0 183 680 FZD7,KIAA2012
SE_02_049500601 chr2:202031782-202040036 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 601 4 169 18 0 172 680 FZD7,KIAA2012
SE_02_147200810 chr2:202031848-202037030 Sample_02_1472 Fetal lung IMR-90 810 1 110 9 0 125 550 FZD7,KIAA2012
SE_02_052400580 chr2:202031857-202040264 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 580 4 175 19 0 170 680 FZD7,KIAA2012
SE_02_052500482 chr2:202031863-202040055 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 482 6 169 18 0 170 680 FZD7,KIAA2012
SE_02_086900535 chr2:202031889-202069783 Sample_02_0869 Fibroblast VH10_NO_UV 535 11 907 99 1 285 680 FZD7,KIAA2012
SE_02_055700838 chr2:202031897-202040054 Sample_02_0557 iPSCs WT hiPSC#1 838 3 168 18 0 170 680 FZD7,KIAA2012
SE_02_094100579 chr2:202031910-202039775 Sample_02_0941 Brain T98G 579 5 163 18 0 167 680 FZD7,KIAA2012,CDK15
SE_02_093400570 chr2:202031968-202037473 Sample_02_0934 Embryo H7-WT 570 3 119 10 0 142 592 FZD7,KIAA2012
SE_02_063500259 chr2:202032005-202037429 Sample_02_0635 Synovial sarcoma HSSYII_Untreated 259 2 116 10 0 141 588 FZD7,KIAA2012
SE_02_117400481 chr2:202032039-202065353 Sample_02_1174 Brain GBM02 481 6 783 90 1 251 680 FZD7,KIAA2012
SE_02_055600660 chr2:202032074-202039867 Sample_02_0556 iPSCs BOFS hiPSC cl1 660 3 161 18 0 170 680 FZD7,KIAA2012
SE_02_074500245 chr2:202032110-202050220 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 245 4 408 49 0 207 680 FZD7,KIAA2012
SE_02_138400403 chr2:202032221-202043668 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 403 3 243 25 0 190 680 FZD7,KIAA2012
SE_02_141000771 chr2:202032247-202065726 Sample_02_1410 Brain GSC6 771 4 795 91 1 251 680 FZD7,KIAA2012
SE_02_154300409 chr2:202032257-202039961 Sample_02_1543 Gastrointestinal Stromal GIST-48 409 2 160 18 0 170 680 FZD7,KIAA2012
SE_02_084900264 chr2:202032298-202037041 Sample_02_0849 iPSCs iPSC_CBP-30 264 2 102 9 0 125 550 FZD7,KIAA2012
SE_02_125900802 chr2:202032346-202039989 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 802 3 154 18 0 170 680 FZD7,KIAA2012
SE_02_084800252 chr2:202032371-202036984 Sample_02_0848 iPSCs iPSC_DMSO 252 2 94 9 0 124 542 FZD7,KIAA2012
SE_02_132500300 chr2:202032492-202039675 Sample_02_1325 Hindbrain Hindbrain derived neural stem cells_NS19_H3.3K27M_WT 300 4 145 18 0 167 680 FZD7,KIAA2012
SE_02_126801013 chr2:202032564-202037060 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 1013 2 91 9 0 125 554 FZD7,KIAA2012
Genomic distribution of SEs associated with KIAA2012
Genome Browser

The strength of the tissue affected by the gene

Expression of KIAA2012

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)